José Ramón López Blanco
José Ramón López Blanco
Anisopter Insightful Research S.L. & Institute of Chemical physics Rocasolano (IQFR-CSIC)
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Cited by
Cited by
iMODS: internal coordinates normal mode analysis server
JR López-Blanco, JI Aliaga, ES Quintana-Ortí, P Chacón
Nucleic acids research 42 (W1), W271-W276, 2014
Structure of promoter-bound TFIID and model of human pre-initiation complex assembly
RK Louder, Y He, JR López-Blanco, J Fang, P Chacón, E Nogales
Nature 531 (7596), 604-609, 2016
iMod: multipurpose normal mode analysis in internal coordinates
JR Lopéz-Blanco, JI Garzón, P Chacón
Bioinformatics 27 (20), 2843-2850, 2011
FRODOCK: a new approach for fast rotational protein–protein docking
JI Garzon, JR Lopéz-Blanco, C Pons, J Kovacs, R Abagyan, ...
Bioinformatics 25 (19), 2544-2551, 2009
The structural basis of flagellin detection by NAIP5: A strategy to limit pathogen immune evasion
JL Tenthorey, N Haloupek, JR López-Blanco, P Grob, E Adamson, ...
Science 358 (6365), 888-893, 2017
iMODFIT: efficient and robust flexible fitting based on vibrational analysis in internal coordinates
JR Lopéz-Blanco, P Chacón
Journal of structural biology 184 (2), 261-270, 2013
FRODOCK 2.0: fast protein–protein docking server
E Ramírez-Aportela, JR López-Blanco, P Chacón
Bioinformatics 32 (15), 2386-2388, 2016
Architecture of the pontin/reptin complex, essential in the assembly of several macromolecular complexes
E Torreira, S Jha, JR López-Blanco, E Arias-Palomo, P Chacón, C Cañas, ...
Structure 16 (10), 1511-1520, 2008
Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid
E Estrin, JR Lopez-Blanco, P Chacón, A Martin
Structure 21 (9), 1624-1635, 2013
Approaching elastic network models to molecular dynamics flexibility
L Orellana, M Rueda, C Ferrer-Costa, JR Lopez-Blanco, P Chacón, ...
Journal of Chemical Theory and Computation 6 (9), 2910-2923, 2010
New generation of elastic network models
JR López-Blanco, P Chacón
Current opinion in structural biology 37, 46-53, 2016
RCD+: Fast loop modeling server
JR López-Blanco, AJ Canosa-Valls, Y Li, P Chacón
Nucleic acids research 44 (W1), W395-W400, 2016
Plasmid replication initiator RepB forms a hexamer reminiscent of ring helicases and has mobile nuclease domains
DR Boer, JA Ruíz‐Masó, JR López‐Blanco, AG Blanco, M Vives‐Llàcer, ...
The EMBO journal 28 (11), 1666-1678, 2009
KORP: knowledge-based 6D potential for fast protein and loop modeling
JR López-Blanco, P Chacón
Bioinformatics 35 (17), 3013-3019, 2019
Understanding nucleotide-regulated FtsZ filament dynamics and the monomer assembly switch with large-scale atomistic simulations
E Ramírez-Aportela, JR López-Blanco, JM Andreu, P Chacón
Biophysical journal 107 (9), 2164-2176, 2014
Structural modeling from electron microscopy data
JR López‐Blanco, P Chacón
Wiley Interdisciplinary Reviews: Computational Molecular Science 5 (1), 62-81, 2015
Exploring large macromolecular functional motions on clusters of multicore processors
JR Lopez-Blanco, R Reyes, JI Aliaga, RM Badia, P Chacon, ...
Journal of Computational Physics 246, 275-288, 2013
Structural mechanism for tyrosine hydroxylase inhibition by dopamine and reactivation by Ser40 phosphorylation
MT Bueno-Carrasco, J Cuéllar, MI Flydal, C Santiago, TA Kråkenes, ...
Nature communications 13 (1), 74, 2022
Normal mode analysis techniques in structural biology
JR López‐Blanco, O Miyashita, F Tama, P Chacón
eLS, 2014
Normal mode analysis of molecular motions in curvilinear coordinates on a non-Eckart body-frame: an application to protein torsion dynamics
J Pesonen, KOE Henriksson, JR López-Blanco, P Chacón
Journal of Mathematical Chemistry 50, 1521-1549, 2012
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