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Elia Stupka
Elia Stupka
Verified email at boehringer-ingelheim.com
Title
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Cited by
Year
Initial sequencing and analysis of the human genome
US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ...
nature 409 (6822), 860-921, 2001
284382001
The transcriptional landscape of the mammalian genome
P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ...
science 309 (5740), 1559-1563, 2005
36232005
The Bioperl toolkit: Perl modules for the life sciences
JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ...
Genome research 12 (10), 1611-1618, 2002
19042002
The Ensembl genome database project
T Hubbard, D Barker, E Birney, G Cameron, Y Chen, L Clark, T Cox, J Cuff, ...
Nucleic acids research 30 (1), 38-41, 2002
18242002
Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes
S Aparicio, J Chapman, E Stupka, N Putnam, J Chia, P Dehal, ...
Science 297 (5585), 1301-1310, 2002
17922002
Lentiviral hematopoietic stem cell gene therapy benefits metachromatic leukodystrophy
A Biffi, E Montini, L Lorioli, M Cesani, F Fumagalli, T Plati, C Baldoli, ...
Science 341 (6148), 1233158, 2013
11932013
Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat
C Carrieri, L Cimatti, M Biagioli, A Beugnet, S Zucchelli, S Fedele, ...
Nature 491 (7424), 454-457, 2012
9102012
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature biotechnology 32 (9), 903-914, 2014
7312014
The BioMart community portal: an innovative alternative to large, centralized data repositories
D Smedley, S Haider, S Durinck, L Pandini, P Provero, J Allen, O Arnaiz, ...
Nucleic acids research 43 (W1), W589-W598, 2015
6742015
Integrated genomic analysis identifies recurrent mutations and evolution patterns driving the initiation and progression of follicular lymphoma
J Okosun, C Bödör, J Wang, S Araf, CY Yang, C Pan, S Boller, D Cittaro, ...
Nature genetics 46 (2), 176-181, 2014
6002014
Genome-wide signatures of convergent evolution in echolocating mammals
J Parker, G Tsagkogeorga, JA Cotton, Y Liu, P Provero, E Stupka, ...
Nature 502 (7470), 228-231, 2013
3562013
Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus
CG Bell, S Finer, CM Lindgren, GA Wilson, VK Rakyan, AE Teschendorff, ...
PloS one 5 (11), e14040, 2010
3132010
Ensembl 2002: accommodating comparative genomics
M Clamp, D Andrews, D Barker, P Bevan, G Cameron, Y Chen, L Clark, ...
Nucleic Acids Research 31 (1), 38-42, 2003
2862003
Germline CDH1 deletions in hereditary diffuse gastric cancer families
C Oliveira, J Senz, P Kaurah, H Pinheiro, R Sanges, A Haegert, G Corso, ...
Human molecular genetics 18 (9), 1545-1555, 2009
2412009
Common variants at the MHC locus and at chromosome 16q24. 1 predispose to Barrett's esophagus
Z Su, LJ Gay, A Strange, C Palles, G Band, DC Whiteman, F Lescai, ...
Nature genetics 44 (10), 1131-1136, 2012
1812012
Immune signature drives leukemia escape and relapse after hematopoietic cell transplantation
C Toffalori, L Zito, V Gambacorta, M Riba, G Oliveira, G Bucci, M Barcella, ...
Nature medicine 25 (4), 603-611, 2019
1772019
PRGdb: a bioinformatics platform for plant resistance gene analysis
W Sanseverino, G Roma, M De Simone, L Faino, S Melito, E Stupka, ...
Nucleic acids research 38 (suppl_1), D814-D821, 2010
1642010
Phylogenomic analyses elucidate the evolutionary relationships of bats
G Tsagkogeorga, J Parker, E Stupka, JA Cotton, SJ Rossiter
Current Biology 23 (22), 2262-2267, 2013
1432013
Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors
A Feber, GA Wilson, L Zhang, N Presneau, B Idowu, TA Down, ...
Genome research 21 (4), 515-524, 2011
1212011
Biopipe: a flexible framework for protocol-based bioinformatics analysis
S Hoon, KK Ratnapu, J Chia, B Kumarasamy, X Juguang, M Clamp, ...
Genome Research 13 (8), 1904-1915, 2003
1202003
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