Barbora Kozlikova
Barbora Kozlikova
assoc. prof., Masaryk University
Verified email at fi.muni.cz
Title
Cited by
Cited by
Year
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures
E Chovancova, A Pavelka, P Benes, O Strnad, J Brezovsky, B Kozlikova, ...
PLoS Comput Biol 8 (10), e1002708, 2012
6752012
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures
B Kozlikova, E Sebestova, V Sustr, J Brezovsky, O Strnad, L Daniel, ...
Bioinformatics 30 (18), 2684-2685, 2014
1332014
Visualization of biomolecular structures: State of the art revisited
B Kozlíková, M Krone, M Falk, N Lindow, M Baaden, D Baum, I Viola, ...
Computer Graphics Forum 36 (8), 178-204, 2017
662017
CAVER: algorithms for analyzing dynamics of tunnels in macromolecules
A Pavelka, E Sebestova, B Kozlikova, J Brezovsky, J Sochor, ...
IEEE/ACM transactions on computational biology and bioinformatics 13 (3 …, 2015
612015
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories
A Jurcik, D Bednar, J Byska, SM Marques, K Furmanova, L Daniel, ...
Bioinformatics 34 (20), 3586-3588, 2018
602018
Visual analysis of biomolecular cavities: State of the art
M Krone, B Kozlíková, N Lindow, M Baaden, D Baum, J Parulek, HC Hege, ...
Computer Graphics Forum 35 (3), 527-551, 2016
522016
Visualization of biomolecular structures: State of the art
B Kozlikova, M Krone, M Falk, N Lindow, M Baaden, D Baum, I Viola, ...
322015
Molecollar and tunnel heat map visualizations for conveying spatio‐temporo‐chemical properties across and along protein voids
J Byška, A Jurčík, ME Gröller, I Viola, B Kozlikova
Computer Graphics Forum 34 (3), 1-10, 2015
262015
Instant construction and visualization of crowded biological environments
T Klein, L Autin, B Kozlíková, DS Goodsell, A Olson, ME Gröller, I Viola
IEEE transactions on visualization and computer graphics 24 (1), 862-872, 2017
252017
AnimoAminoMiner: Exploration of protein tunnels and their properties in molecular dynamics
J Byška, M Le Muzic, ME Gröller, I Viola, B Kozlikova
IEEE transactions on visualization and computer graphics 22 (1), 747-756, 2015
202015
Human-computer interaction in real-3D and Pseudo-3D cartographic visualization: A comparative study
K Špriňarová, V Juřík, Č Šašinka, L Herman, Z Štěrba, Z Stachoň, ...
Cartography-Maps Connecting the World, 59-73, 2015
162015
Interactive exploration of ligand transportation through protein tunnels
K Furmanová, M Jarešová, J Byška, A Jurčík, J Parulek, H Hauser, ...
BMC bioinformatics 18 (2), 1-16, 2017
142017
Tunnel detection in protein structures using sampling-based motion planning
V Vonásek, B Kozlíková
2017 11th International Workshop on Robot Motion and Control (RoMoCo), 185-192, 2017
122017
Multiscale molecular visualization
H Miao, T Klein, D Kouřil, P Mindek, K Schatz, ME Gröller, B Kozlíková, ...
Journal of molecular biology 431 (6), 1049-1070, 2019
112019
Labels on levels: labeling of multi-scale multi-instance and crowded 3D biological environments
D Kouřil, L Čmolík, B Kozlíková, HY Wu, G Johnson, DS Goodsell, ...
IEEE transactions on visualization and computer graphics 25 (1), 977-986, 2018
112018
Accelerated visualization of transparent molecular surfaces in molecular dynamics
A Jurčík, J Parulek, J Sochor, B Kozlikova
2016 IEEE Pacific Visualization Symposium (PacificVis), 112-119, 2016
112016
COZOID: contact zone identifier for visual analysis of protein-protein interactions
K Furmanová, J Byška, EM Gröller, I Viola, JJ Paleček, B Kozlíková
BMC bioinformatics 19 (1), 1-17, 2018
102018
Visualization of large molecular trajectories
D Duran, P Hermosilla, T Ropinski, B Kozlíková, A Vinacua, PP Vázquez
IEEE transactions on visualization and computer graphics 25 (1), 987-996, 2018
102018
Forensic 3D facial identication software (FIDENTIS)
I Chalás, P Urbanová, Z Kotulanová, M Jandová, M Králík, B Kozlíková, ...
102014
Visibility-based approach to surface detection of tunnels in proteins
A Jurčík, J Byška, J Sochor, B Kozlíková
Proceedings of the 31st Spring Conference on Computer Graphics, 65-72, 2015
92015
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