| High-throughput functional annotation and data mining with the Blast2GO suite S Götz, JM García-Gómez, J Terol, TD Williams, SH Nagaraj, MJ Nueda, ... Nucleic acids research 36 (10), 3420-3435, 2008 | 2650 | 2008 |
| FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes F Al-Shahrour, R Díaz-Uriarte, J Dopazo Bioinformatics 20 (4), 578-580, 2004 | 1241 | 2004 |
| Differential expression in RNA-seq: a matter of depth S Tarazona, F García-Alcalde, J Dopazo, A Ferrer, A Conesa Genome research 21 (12), 2213-2223, 2011 | 1172 | 2011 |
| A hierarchical unsupervised growing neural network for clustering gene expression patterns J Herrero, A Valencia, J Dopazo Bioinformatics 17 (2), 126, 2001 | 739 | 2001 |
| The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models MaQC Consortium Nature biotechnology 28 (8), 827, 2010 | 665 | 2010 |
| Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus BM Javierre, AF Fernandez, J Richter, F Al-Shahrour, JI Martin-Subero, ... Genome research 20 (2), 170-179, 2010 | 580 | 2010 |
| A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Z Su, PP Łabaj, S Li, J Thierry-Mieg, D Thierry-Mieg, W Shi, C Wang, ... Nature biotechnology 32 (9), 903-914, 2014 | 541 | 2014 |
| Qualimap: evaluating next-generation sequencing alignment data F García-Alcalde, K Okonechnikov, J Carbonell, LM Cruz, S Götz, ... Bioinformatics 28 (20), 2678-2679, 2012 | 449 | 2012 |
| ETE: a python Environment for Tree Exploration J Huerta-Cepas, J Dopazo, T Gabaldón BMC bioinformatics 11 (1), 24, 2010 | 379 | 2010 |
| Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ... Nucleic acids research 38 (suppl_2), W210-W213, 2010 | 341 | 2010 |
| BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments F Al-Shahrour, P Minguez, J Tárraga, D Montaner, E Alloza, ... Nucleic acids research 34 (suppl_2), W472-W476, 2006 | 320 | 2006 |
| Initial genomics of the human nucleolus A Németh, A Conesa, J Santoyo-Lopez, I Medina, D Montaner, B Péterfia, ... PLoS Genet 6 (3), e1000889, 2010 | 311 | 2010 |
| Differential lipid partitioning between adipocytes and tissue macrophages modulates macrophage lipotoxicity and M2/M1 polarization in obese mice X Prieur, CYL Mok, VR Velagapudi, V Núñez, L Fuentes, D Montaner, ... Diabetes 60 (3), 797-809, 2011 | 307 | 2011 |
| FatiGO+: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments F Al-Shahrour, P Minguez, J Tárraga, I Medina, E Alloza, D Montaner, ... Nucleic acids research 35 (suppl_2), W91-W96, 2007 | 298 | 2007 |
| BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments F Al-Shahrour, P Minguez, JM Vaquerizas, L Conde, J Dopazo Nucleic acids research 33 (suppl_2), W460-W464, 2005 | 295 | 2005 |
| PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes L Conde, JM Vaquerizas, H Dopazo, L Arbiza, J Reumers, F Rousseau, ... Nucleic acids research 34 (suppl_2), W621-W625, 2006 | 256 | 2006 |
| Phylogenetic reconstruction using an unsupervised growing neural network that adopts the topology of a phylogenetic tree J Dopazo, JM Carazo Journal of molecular evolution 44 (2), 226-233, 1997 | 243 | 1997 |
| GEPAS: a web-based resource for microarray gene expression data analysis J Herrero, F Al-Shahrour, R Diaz-Uriarte, A Mateos, JM Vaquerizas, ... Nucleic acids research 31 (13), 3461-3467, 2003 | 231 | 2003 |
| Evolutionary pattern of human respiratory syncytial virus (subgroup A): cocirculating lineages and correlation of genetic and antigenic changes in the G glycoprotein. O García, M Martin, J Dopazo, J Arbiza, S Frabasile, J Russi, M Hortal, ... Journal of virology 68 (9), 5448-5459, 1994 | 222 | 1994 |
| Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection AD Ewing, KE Houlahan, Y Hu, K Ellrott, C Caloian, TN Yamaguchi, ... Nature methods 12 (7), 623-630, 2015 | 198 | 2015 |
David MontanerGenomics England - 100K Genomes ProjectVerified email at genomicsengland.co.uk
