| The cell collective: toward an open and collaborative approach to systems biology T Helikar, B Kowal, S McClenathan, M Bruckner, T Rowley, A Madrahimov, ... BMC systems biology 6, 1-14, 2012 | 252 | 2012 |
| SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ... BMC systems biology 7, 1-15, 2013 | 190 | 2013 |
| A comprehensive, multi-scale dynamical model of ErbB receptor signal transduction in human mammary epithelial cells T Helikar, N Kochi, B Kowal, M Dimri, M Naramura, SM Raja, V Band, ... PloS one 8 (4), e61757, 2013 | 51 | 2013 |
| A cell simulator platform: the cell collective T Helikar, B Kowal, JA Rogers Clinical Pharmacology & Therapeutics 93 (5), 393-395, 2013 | 39 | 2013 |
| Dynamics of influenza virus and human host interactions during infection and replication cycle A Madrahimov, T Helikar, B Kowal, G Lu, J Rogers Bulletin of mathematical biology 75, 988-1011, 2013 | 35 | 2013 |
| Bio-logic builder: a non-technical tool for building dynamical, qualitative models T Helikar, B Kowal, A Madrahimov, M Shrestha, J Pedersen, K Limbu, ... Public Library of Science 7 (10), e46417, 2012 | 20 | 2012 |
| Programmatic access to logical models in the Cell Collective modeling environment via a REST API BM Kowal, TR Schreier, JT Dauer, T Helikar BioSystems 139, 12-16, 2016 | 6 | 2016 |
| COMPUTATIONAL MODELING INTERVENTION: USING DYNAMICAL MODELS TO TEACH COMPLEX BIOLOGICAL PROCESSES AJ Crowther, T Helikar, N Galt, J Dauer, H Berganr, B Kowal | | 2016 |
| Bio-Logic Builder: Supplementary Information T Helikar, B Kowal, A Madrahimov, M Shrestha, J Pedersen, K Limbu, ... | | |
