Arman Fathizadeh
Arman Fathizadeh
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Variation of protein corona composition of gold nanoparticles following plasmonic heating
M Mahmoudi, SE Lohse, CJ Murphy, A Fathizadeh, A Montazeri, ...
Nano letters 14 (1), 6-12, 2014
Bimodal phonon scattering in graphene grain boundaries
P Yasaei, A Fathizadeh, R Hantehzadeh, AK Majee, A El-Ghandour, ...
Nano letters 15 (7), 4532-4540, 2015
Interfacial Thermal Transport in Monolayer MoS2‐ and Graphene‐Based Devices
P Yasaei, CJ Foss, K Karis, A Behranginia, AI El‐Ghandour, A Fathizadeh, ...
Advanced Materials Interfaces 4 (17), 1700334, 2017
Calculating iso-committor surfaces as optimal reaction coordinates with milestoning
R Elber, JM Bello-Rivas, P Ma, AE Cardenas, A Fathizadeh
Entropy 19 (5), 219, 2017
Diffusion and self-assembly of C60 molecules on monolayer graphyne sheets
M Ozmaian, A Fathizadeh, M Jalalvand, MR Ejtehadi, SMV Allaei
Scientific Reports 6 (1), 21910, 2016
Rigid-body molecular dynamics of DNA inside a nucleosome
A Fathizadeh, A Berdy Besya, M Reza Ejtehadi, H Schiessel
The European Physical Journal E 36, 1-10, 2013
The transition between active and inactive conformations of Abl kinase studied by rock climbing and Milestoning
B Narayan, A Fathizadeh, C Templeton, P He, S Arasteh, R Elber, ...
Biochimica et Biophysica Acta (BBA)-General Subjects 1864 (4), 129508, 2020
Interfacial dynamics in lipid membranes: the effects of headgroup structures
ML Valentine, MK Waterland, A Fathizadeh, R Elber, CR Baiz
The Journal of Physical Chemistry B 125 (5), 1343-1350, 2021
Molecular dynamics simulation of supercoiled DNA rings
A Fathizadeh, H Schiessel, MR Ejtehadi
Macromolecules 48 (1), 164-172, 2015
Ion permeation through a phospholipid membrane: transition state, path splitting, and calculation of permeability
A Fathizadeh, R Elber
Journal of chemical theory and computation 15 (1), 720-730, 2018
A mixed alchemical and equilibrium dynamics to simulate heterogeneous dense fluids: Illustrations for Lennard-Jones mixtures and phospholipid membranes
A Fathizadeh, R Elber
The Journal of Chemical Physics 149 (7), 2018
Definition of the persistence length in the coarse-grained models of DNA elasticity
A Fathizadeh, B Eslami-Mossallam, MR Ejtehadi
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 86 (5 …, 2012
Modeling molecular kinetics with Milestoning
R Elber, A Fathizadeh, P Ma, H Wang
Wiley Interdisciplinary Reviews: Computational Molecular Science 11 (4), e1512, 2021
Computer simulations of a heterogeneous membrane with enhanced sampling techniques
YK Cherniavskyi, A Fathizadeh, R Elber, DP Tieleman
The Journal of Chemical Physics 153 (14), 2020
Modeling and analysis of intercalant effects on circular DNA conformation
E Krueger, J Shim, A Fathizadeh, AN Chang, B Subei, KM Yocham, ...
ACS nano 10 (9), 8910-8917, 2016
Confinement dynamics of a semiflexible chain inside nano-spheres
A Fathizadeh, M Heidari, B Eslami-Mossallam, MR Ejtehadi
The Journal of chemical physics 139 (4), 2013
Defect-assisted permeation through a phospholipid membrane: Experimental and computational study of the peptide WKW
A Fathizadeh, M Kogan, CM Anderson, LJ Webb, R Elber
The Journal of Physical Chemistry B 123 (31), 6792-6798, 2019
Rock climbing: A local-global algorithm to compute minimum energy and minimum free energy pathways
C Templeton, SH Chen, A Fathizadeh, R Elber
The Journal of Chemical Physics 147 (15), 2017
Graphyne-3: a highly efficient candidate for separation of small gas molecules from gaseous mixtures
K Azizi, SM Vaez Allaei, A Fathizadeh, A Sadeghi, M Sahimi
Scientific Reports 11 (1), 16325, 2021
Impact of the protonation state of phosphatidylinositol 4, 5-bisphosphate (PIP2) on the binding kinetics and thermodynamics to transient receptor potential vanilloid (TRPV5): a …
A Fathizadeh, E Senning, R Elber
The Journal of Physical Chemistry B 125 (33), 9547-9556, 2021
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