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Michael B Clark
Michael B Clark
Senior Research Fellow, University of Melbourne
Verified email at unimelb.edu.au - Homepage
Title
Cited by
Cited by
Year
lncRNAdb: a reference database for long noncoding RNAs
PP Amaral, MB Clark, DK Gascoigne, ME Dinger, JS Mattick
Nucleic acids research 39 (suppl_1), D146-D151, 2011
5882011
Genome-wide analysis of long noncoding RNA stability
MB Clark, RL Johnston, M Inostroza-Ponta, AH Fox, E Fortini, P Moscato, ...
Genome research 22 (5), 885-898, 2012
5062012
lncRNAdb v2. 0: expanding the reference database for functional long noncoding RNAs
XC Quek, DW Thomson, JLV Maag, N Bartonicek, B Signal, MB Clark, ...
Nucleic acids research 43 (D1), D168-D173, 2015
4812015
The reality of pervasive transcription
MB Clark, PP Amaral, FJ Schlesinger, ME Dinger, RJ Taft, JL Rinn, ...
PLoS Biol 9 (7), e1000625, 2011
4502011
Long noncoding RNAs in cell biology
MB Clark, JS Mattick
Seminars in cell & developmental biology 22 (4), 366-376, 2011
3522011
SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
ME Askarian-Amiri, J Crawford, JD French, CE Smart, MA Smith, MB Clark, ...
Rna 17 (5), 878-891, 2011
3252011
Genome-wide discovery of human splicing branchpoints
TR Mercer, MB Clark, SB Andersen, ME Brunck, W Haerty, J Crawford, ...
Genome research 25 (2), 290-303, 2015
1792015
Targeted sequencing for gene discovery and quantification using RNA CaptureSeq
TR Mercer, MB Clark, J Crawford, ME Brunck, DJ Gerhardt, RJ Taft, ...
Nature protocols 9 (5), 989-1009, 2014
1512014
Quantitative gene profiling of long noncoding RNAs with targeted RNA sequencing
MB Clark, TR Mercer, G Bussotti, T Leonardi, KR Haynes, J Crawford, ...
Nature methods 12 (4), 339-342, 2015
1402015
RNAcentral: a comprehensive database of non-coding RNA sequences
RNAcentral Consortium
Nucleic acids research 45 (Database issue), D128, 2017
1342017
DNase I–hypersensitive exons colocalize with promoters and distal regulatory elements
TR Mercer, SL Edwards, MB Clark, SJ Neph, H Wang, AB Stergachis, ...
Nature genetics 45 (8), 852-859, 2013
1312013
RNAcentral: an international database of ncRNA sequences
RNAcentral Consortium
Nucleic acids research 43 (Database issue), D123, 2015
982015
The dark matter rises: the expanding world of regulatory RNAs
MB Clark, A Choudhary, MA Smith, RJ Taft, JS Mattick
Essays in biochemistry 54, 1-16, 2013
97*2013
Mammalian gene PEG10 expresses two reading frames by high efficiency–1 frameshifting in embryonic-associated tissues
MB Clark, M Jänicke, U Gottesbühren, T Kleffmann, M Legge, ES Poole, ...
Journal of Biological Chemistry 282 (52), 37359-37369, 2007
822007
Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes
DK Gascoigne, SW Cheetham, PB Cattenoz, MB Clark, PP Amaral, ...
Bioinformatics 28 (23), 3042-3050, 2012
792012
Long noncoding RNAs CUPID1 and CUPID2 mediate breast cancer risk at 11q13 by modulating the response to DNA damage
JA Betts, MM Marjaneh, F Al-Ejeh, YC Lim, W Shi, H Sivakumaran, ...
The American Journal of Human Genetics 101 (2), 255-266, 2017
772017
Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brain
MB Clark, T Wrzesinski, AB Garcia, NAL Hall, JE Kleinman, T Hyde, ...
Molecular psychiatry, 2019
762019
Universal alternative splicing of noncoding exons
IW Deveson, ME Brunck, J Blackburn, E Tseng, T Hon, TA Clark, MB Clark, ...
Cell systems 6 (2), 245-255. e5, 2018
712018
Intergenic disease-associated regions are abundant in novel transcripts
N Bartonicek, MB Clark, XC Quek, JR Torpy, AL Pritchard, JLV Maag, ...
Genome biology 18 (1), 241, 2017
352017
Improved definition of the mouse transcriptome via targeted RNA sequencing
G Bussotti, T Leonardi, MB Clark, TR Mercer, J Crawford, L Malquori, ...
Genome research 26 (5), 705-716, 2016
252016
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