Elisabeth Remy
Elisabeth Remy
Chargée de Recherche, CNRS, Aix-Marseille Université
Dirección de correo verificada de univ-amu.fr
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GOToolBox: functional analysis of gene datasets based on Gene Ontology
D Martin, C Brun, E Remy, P Mouren, D Thieffry, B Jacq
Genome biology 5 (12), R101, 2004
4222004
Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework
É Remy, P Ruet, D Thieffry
Advances in Applied Mathematics 41 (3), 335-350, 2008
2062008
The Pht1;9 and Pht1;8 transporters mediate inorganic phosphate acquisition by the Arabidopsis thaliana root during phosphorus starvation
E Remy, TR Cabrito, RA Batista, MC Teixeira, I Sá‐Correia, P Duque
New Phytologist 195 (2), 356-371, 2012
1382012
Isoperimetry and heat kernel decay on percolation clusters
P Mathieu, E Remy
The Annals of Probability 32 (1A), 100-128, 2004
1302004
GeneANOVA—gene expression analysis of variance
G Didier, P Brézellec, E Remy, A Hénaut
Bioinformatics 18 (3), 490-491, 2002
1142002
Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli
E Simao, E Remy, D Thieffry, C Chaouiya
Bioinformatics 21 (suppl_2), ii190-ii196, 2005
1122005
A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis
E Remy, TR Cabrito, P Baster, RA Batista, MC Teixeira, J Friml, ...
The Plant Cell 25 (3), 901-926, 2013
1092013
Dynamically consistent reduction of logical regulatory graphs
A Naldi, E Remy, D Thieffry, C Chaouiya
Theoretical Computer Science 412 (21), 2207-2218, 2011
1032011
Petri net modelling of biological regulatory networks
C Chaouiya, E Remy, D Thieffry
Journal of Discrete Algorithms 6 (2), 165-177, 2008
1032008
Qualitative analysis of regulatory graphs: a computational tool based on a discrete formal framework
C Chaouiya, E Remy, B Mossé, D Thieffry
Positive systems, 119-126, 2003
942003
Qualitative modelling of genetic networks: From logical regulatory graphs to standard petri nets
C Chaouiya, E Remy, P Ruet, D Thieffry
International Conference on Application and Theory of Petri Nets, 137-156, 2004
892004
A description of dynamical graphs associated to elementary regulatory circuits
E Remy, B Mossé, C Chaouiya, D Thieffry
Bioinformatics 19 (suppl_2), ii172-ii178, 2003
822003
A critical assessment of Agrobacterium tumefaciens-mediated transformation as a tool for pathogenicity gene discovery in the phytopathogenic fungus Leptosphaeria maculans
F Blaise, E Rémy, M Meyer, L Zhou, JP Narcy, J Roux, MH Balesdent, ...
Fungal Genetics and Biology 44 (2), 123-138, 2007
732007
From minimal signed circuits to the dynamics of Boolean regulatory networks
E Remy, P Ruet
Bioinformatics 24 (16), i220-i226, 2008
662008
A reduction of logical regulatory graphs preserving essential dynamical properties
A Naldi, E Remy, D Thieffry, C Chaouiya
International Conference on Computational Methods in Systems Biology, 266-280, 2009
632009
Intron retention in the 5′ UTR of the novel ZIF2 transporter enhances translation to promote zinc tolerance in Arabidopsis
E Remy, TR Cabrito, RA Batista, MAM Hussein, MC Teixeira, ...
PLoS genetics 10 (5), 2014
622014
Dynamical modeling and analysis of large cellular regulatory networks
D Bérenguier, C Chaouiya, PT Monteiro, A Naldi, E Remy, D Thieffry, ...
Chaos: An Interdisciplinary Journal of Nonlinear Science 23 (2), 025114, 2013
572013
From logical regulatory graphs to standard petri nets: dynamical roles and functionality of feedback circuits
E Remy, P Ruet, L Mendoza, D Thieffry, C Chaouiya
Transactions on Computational Systems Biology VII, 56-72, 2006
512006
Discovery of drug synergies in gastric cancer cells predicted by logical modeling
Å Flobak, A Baudot, E Remy, L Thommesen, D Thieffry, M Kuiper, ...
PLoS computational biology 11 (8), 2015
482015
A modeling approach to explain mutually exclusive and co-occurring genetic alterations in bladder tumorigenesis
E Remy, S Rebouissou, C Chaouiya, A Zinovyev, F Radvanyi, L Calzone
Cancer research 75 (19), 4042-4052, 2015
472015
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Artículos 1–20