| GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists P Carmona-Saez, M Chagoyen, F Tirado, JM Carazo, A Pascual-Montano Genome biology 8, 1-8, 2007 | 681 | 2007 |
| GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information R Nogales-Cadenas, P Carmona-Saez, M Vazquez, C Vicente, X Yang, ... Nucleic acids research 37 (suppl_2), W317-W322, 2009 | 502 | 2009 |
| Biclustering of gene expression data by non-smooth non-negative matrix factorization P Carmona-Saez, RD Pascual-Marqui, F Tirado, JM Carazo, ... BMC bioinformatics 7, 1-18, 2006 | 281 | 2006 |
| Integrated analysis of gene expression by association rules discovery P Carmona-Saez, M Chagoyen, A Rodriguez, O Trelles, JM Carazo, ... BMC bioinformatics 7, 1-16, 2006 | 181 | 2006 |
| Exosomal miRNA profile as complementary tool in the diagnostic and prediction of treatment response in localized breast cancer under neoadjuvant chemotherapy A Rodríguez-Martínez, D de Miguel-Pérez, FG Ortega, JL García-Puche, ... Breast Cancer Research 21, 1-9, 2019 | 179 | 2019 |
| ImaGEO: integrative gene expression meta-analysis from GEO database D Toro-Domínguez, J Martorell-Marugán, R López-Domínguez, ... Bioinformatics 35 (5), 880-882, 2019 | 145 | 2019 |
| Integrative analysis reveals a molecular stratification of systemic autoimmune diseases G Barturen, S Babaei, F Català‐Moll, M Martínez‐Bueno, Z Makowska, ... Arthritis & rheumatology 73 (6), 1073-1085, 2021 | 140 | 2021 |
| MetaGenyo: a web tool for meta-analysis of genetic association studies J Martorell-Marugan, D Toro-Dominguez, ME Alarcon-Riquelme, ... BMC bioinformatics 18, 1-6, 2017 | 125 | 2017 |
| bioNMF: a versatile tool for non-negative matrix factorization in biology A Pascual-Montano, P Carmona-Saez, M Chagoyen, F Tirado, JM Carazo, ... BMC bioinformatics 7, 1-9, 2006 | 115 | 2006 |
| Discovering semantic features in the literature: a foundation for building functional associations M Chagoyen, P Carmona-Saez, H Shatkay, JM Carazo, ... BMC bioinformatics 7, 1-19, 2006 | 114 | 2006 |
| Functional enrichment analysis of regulatory elements A Garcia-Moreno, R López-Domínguez, JA Villatoro-García, ... Biomedicines 10 (3), 590, 2022 | 98 | 2022 |
| Transcriptional profiling of MCF7 breast cancer cells in response to 5‐Fluorouracil: Relationship with cell cycle changes and apoptosis, and identification of novel targets of p53 H Hernández‐Vargas, E Ballestar, P Carmona‐Saez, C von Kobbe, ... International journal of cancer 119 (5), 1164-1175, 2006 | 96 | 2006 |
| Stratification of systemic lupus erythematosus patients into three groups of disease activity progression according to longitudinal gene expression D Toro‐Domínguez, J Martorell‐Marugán, D Goldman, M Petri, ... Arthritis & rheumatology 70 (12), 2025-2035, 2018 | 92 | 2018 |
| Deep learning in omics data analysis and precision medicine J Martorell-Marugán, S Tabik, Y Benhammou, C del Val, I Zwir, F Herrera, ... Exon Publications, 37-53, 2019 | 87 | 2019 |
| Shared signatures between rheumatoid arthritis, systemic lupus erythematosus and Sjögren’s syndrome uncovered through gene expression meta-analysis D Toro-Domínguez, P Carmona-Sáez, ME Alarcón-Riquelme Arthritis research & therapy 16, 1-8, 2014 | 82 | 2014 |
| A survey of gene expression meta-analysis: methods and applications D Toro-Domínguez, JA Villatoro-Garciá, J Martorell-Marugán, ... Briefings in Bioinformatics 22 (2), 1694-1705, 2021 | 79 | 2021 |
| DatAC: A visual analytics platform to explore climate and air quality indicators associated with the COVID-19 pandemic in Spain J Martorell-Marugán, JA Villatoro-García, A García-Moreno, ... Science of the Total Environment 750, 141424, 2021 | 61 | 2021 |
| Gut microbiota composition is associated with the global DNA methylation pattern in obesity B Ramos-Molina, L Sánchez-Alcoholado, A Cabrera-Mulero, ... Frontiers in genetics 10, 613, 2019 | 61 | 2019 |
| Placental DNA methylation signatures of maternal smoking during pregnancy and potential impacts on fetal growth TM Everson, M Vives-Usano, E Seyve, A Cardenas, M Lacasaña, ... Nature Communications 12 (1), 5095, 2021 | 58 | 2021 |
| Finding closed frequent item sets by intersecting transactions C Borgelt, X Yang, R Nogales-Cadenas, P Carmona-Saez, ... Proceedings of the 14th International Conference on Extending Database …, 2011 | 57 | 2011 |
