| GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists P Carmona-Saez, M Chagoyen, F Tirado, JM Carazo, A Pascual-Montano Genome biology 8, 1-8, 2007 | 659 | 2007 |
| GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information R Nogales-Cadenas, P Carmona-Saez, M Vazquez, C Vicente, X Yang, ... Nucleic acids research 37 (suppl_2), W317-W322, 2009 | 490 | 2009 |
| Biclustering of gene expression data by non-smooth non-negative matrix factorization P Carmona-Saez, RD Pascual-Marqui, F Tirado, JM Carazo, ... BMC bioinformatics 7, 1-18, 2006 | 265 | 2006 |
| Integrated analysis of gene expression by association rules discovery P Carmona-Saez, M Chagoyen, A Rodriguez, O Trelles, JM Carazo, ... BMC bioinformatics 7 (1), 1-16, 2006 | 179 | 2006 |
| Exosomal miRNA profile as complementary tool in the diagnostic and prediction of treatment response in localized breast cancer under neoadjuvant chemotherapy A Rodríguez-Martínez, D de Miguel-Pérez, FG Ortega, JL García-Puche, ... Breast Cancer Research 21 (1), 1-9, 2019 | 121 | 2019 |
| bioNMF: a versatile tool for non-negative matrix factorization in biology A Pascual-Montano, P Carmona-Saez, M Chagoyen, F Tirado, JM Carazo, ... BMC bioinformatics 7 (1), 1-9, 2006 | 108 | 2006 |
| Discovering semantic features in the literature: a foundation for building functional associations M Chagoyen, P Carmona-Saez, H Shatkay, JM Carazo, ... BMC bioinformatics 7 (1), 1-19, 2006 | 106 | 2006 |
| ImaGEO: integrative gene expression meta-analysis from GEO database D Toro-Domínguez, J Martorell-Marugán, R López-Domínguez, ... Bioinformatics 35 (5), 880-882, 2019 | 97 | 2019 |
| MetaGenyo: a web tool for meta-analysis of genetic association studies J Martorell-Marugan, D Toro-Dominguez, ME Alarcon-Riquelme, ... BMC bioinformatics 18 (1), 1-6, 2017 | 88 | 2017 |
| Transcriptional profiling of MCF7 breast cancer cells in response to 5‐Fluorouracil: Relationship with cell cycle changes and apoptosis, and identification of novel targets of p53 H Hernández‐Vargas, E Ballestar, P Carmona‐Saez, C von Kobbe, ... International journal of cancer 119 (5), 1164-1175, 2006 | 86 | 2006 |
| Shared signatures between rheumatoid arthritis, systemic lupus erythematosus and Sjögren’s syndrome uncovered through gene expression meta-analysis D Toro-Domínguez, P Carmona-Sáez, ME Alarcón-Riquelme Arthritis research & therapy 16, 1-8, 2014 | 69 | 2014 |
| Stratification of systemic lupus erythematosus patients into three groups of disease activity progression according to longitudinal gene expression D Toro‐Domínguez, J Martorell‐Marugán, D Goldman, M Petri, ... Arthritis & rheumatology 70 (12), 2025-2035, 2018 | 68 | 2018 |
| Integrative analysis reveals a molecular stratification of systemic autoimmune diseases G Barturen, S Babaei, F Català‐Moll, M Martínez‐Bueno, Z Makowska, ... Arthritis & rheumatology 73 (6), 1073-1085, 2021 | 64 | 2021 |
| Deep learning in omics data analysis and precision medicine J Martorell-Marugán, S Tabik, Y Benhammou, C del Val, I Zwir, F Herrera, ... Exon Publications, 37-53, 2019 | 52 | 2019 |
| A free radical‐generating system induces the cholesterol biosynthesis pathway: a role in Alzheimer's disease M Recuero, MC Vicente, A Martínez‐García, MC Ramos, ... Aging cell 8 (2), 128-139, 2009 | 51 | 2009 |
| Finding closed frequent item sets by intersecting transactions C Borgelt, X Yang, R Nogales-Cadenas, P Carmona-Saez, ... Proceedings of the 14th International Conference on Extending Database …, 2011 | 50 | 2011 |
| DatAC: A visual analytics platform to explore climate and air quality indicators associated with the COVID-19 pandemic in Spain J Martorell-Marugán, JA Villatoro-García, A García-Moreno, ... Science of the Total Environment 750, 141424, 2021 | 47 | 2021 |
| SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays MA Anton, D Gorostiaga, E Guruceaga, V Segura, P Carmona-Saez, ... Genome Biology 9 (2), 1-20, 2008 | 46 | 2008 |
| bioNMF: a web-based tool for nonnegative matrix factorization in biology E Mejía-Roa, P Carmona-Saez, R Nogales, C Vicente, M Vázquez, ... Nucleic acids research 36 (suppl_2), W523-W528, 2008 | 45 | 2008 |
| A survey of gene expression meta-analysis: methods and applications D Toro-Domínguez, JA Villatoro-García, J Martorell-Marugán, ... Briefings in Bioinformatics 22 (2), 1694-1705, 2021 | 37 | 2021 |
