James Tiedje
James Tiedje
Professor of Plant, Soil and Microbial Sciences and of Microbiology and Molecular Genetics, Michigan
Verified email at msu.edu
Title
Cited by
Cited by
Year
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Q Wang, GM Garrity, JM Tiedje, JR Cole
Applied and environmental microbiology 73 (16), 5261-5267, 2007
123182007
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
JR Cole, Q Wang, E Cardenas, J Fish, B Chai, RJ Farris, ...
Nucleic acids research 37 (suppl_1), D141-D145, 2009
46892009
DNA recovery from soils of diverse composition.
J Zhou, MA Bruns, JM Tiedje
Applied and environmental microbiology 62 (2), 316-322, 1996
34661996
The RDP (ribosomal database project) continues
BL Maidak, JR Cole, TG Lilburn, CT Parker Jr, PR Saxman, JM Stredwick, ...
Nucleic acids research 28 (1), 173-174, 2000
2908*2000
Ribosomal Database Project: data and tools for high throughput rRNA analysis
JR Cole, Q Wang, JA Fish, B Chai, DM McGarrell, Y Sun, CT Brown, ...
Nucleic acids research 42 (D1), D633-D642, 2014
25632014
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
J Goris, KT Konstantinidis, JA Klappenbach, T Coenye, P Vandamme, ...
International journal of systematic and evolutionary microbiology 57 (1), 81-91, 2007
25052007
Ecology of denitrification and dissimilatory nitrate reduction to ammonium
JM Tiedje
Biology of anaerobic microorganisms 717, 179-244, 1988
18661988
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
JR Cole, B Chai, RJ Farris, Q Wang, SA Kulam, DM McGarrell, GM Garrity, ...
Nucleic acids research 33 (suppl_1), D294-D296, 2005
16162005
The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
JR Cole, B Chai, TL Marsh, RJ Farris, Q Wang, SA Kulam, S Chandra, ...
Nucleic acids research 31 (1), 442-443, 2003
16152003
Tansley Review No. 95 15N natural abundance in soil‐plant systems
P Högberg
New Phytologist 137 (2), 179-203, 1997
15581997
Genomic insights that advance the species definition for prokaryotes
KT Konstantinidis, JM Tiedje
Proceedings of the National Academy of Sciences 102 (7), 2567-2572, 2005
14572005
Diverse and abundant antibiotic resistance genes in Chinese swine farms
YG Zhu, TA Johnson, JQ Su, M Qiao, GX Guo, RD Stedtfeld, ...
Proceedings of the National Academy of Sciences 110 (9), 3435-3440, 2013
13672013
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
JR Cole, B Chai, RJ Farris, Q Wang, AS Kulam-Syed-Mohideen, ...
Nucleic acids research 35 (suppl_1), D169-D172, 2007
11852007
Denitrification
JM Tiedje
Methods of Soil Analysis: Part 2 Chemical and Microbiological Properties 9 …, 1983
1028*1983
A new version of the RDP (Ribosomal Database Project)
BL Maidak, JR Cole, CT Parker Jr, GM Garrity, N Larsen, B Li, TG Lilburn, ...
Nucleic acids research 27 (1), 171-173, 1999
9751999
Microbial reductive dehalogenation.
WW Mohn, JM Tiedje
Microbiology and Molecular Biology Reviews 56 (3), 482-507, 1992
9311992
The planned introduction of genetically engineered organisms: ecological considerations and recommendations
JM Tiedje, RK Colwell, YL Grossman, RE Hodson, RE Lenski, RN Mack, ...
Ecology 70 (2), 298-315, 1989
8041989
Towards environmental systems biology of Shewanella
JK Fredrickson, MF Romine, AS Beliaev, JM Auchtung, ME Driscoll, ...
Nature Reviews Microbiology 6 (8), 592-603, 2008
8012008
Phases of denitrification following oxygen depletion in soil
MS Smith, JM Tiedje
Soil Biology and Biochemistry 11 (3), 261-267, 1979
7511979
DNA probe method for the detection of specific microorganisms in the soil bacterial community
WE Holben, JK Jansson, BK Chelm, JM Tiedje
Applied and Environmental Microbiology 54 (3), 703-711, 1988
7191988
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