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Ronald P. de Vries
Ronald P. de Vries
Westerdijk Fungal Biodiversity Institute
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The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ...
Science 336 (6089), 1715-1719, 2012
18822012
Aspergillus Enzymes Involved in Degradation of Plant Cell Wall Polysaccharides
RP de Vries, J Visser
Microbiology and molecular biology reviews 65 (4), 497-522, 2001
14752001
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
J Kämper, R Kahmann, M Bölker, LJ Ma, T Brefort, BJ Saville, F Banuett, ...
Nature 444 (7115), 97-101, 2006
14012006
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
HJ Pel, JH de Winde, DB Archer, PS Dyer, G Hofmann, PJ Schaap, ...
Nature biotechnology 25 (2), 221-231, 2007
13992007
Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea
J Amselem, CA Cuomo, JAL van Kan, M Viaud, EP Benito, A Couloux, ...
PLoS genetics 7 (8), e1002230, 2011
11392011
Fungal enzyme sets for plant polysaccharide degradation
J van den Brink, RP de Vries
Applied microbiology and biotechnology 91 (6), 1477-1492, 2011
7102011
The plant cell wall–decomposing machinery underlies the functional diversity of forest fungi
DC Eastwood, D Floudas, M Binder, A Majcherczyk, P Schneider, A Aerts, ...
Science 333 (6043), 762-765, 2011
6482011
Genome sequence of the model mushroom Schizophyllum commune
RA Ohm, JF De Jong, LG Lugones, A Aerts, E Kothe, JE Stajich, ...
Nature biotechnology 28 (9), 957-963, 2010
6432010
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
SB Goodwin, S Ben M'Barek, B Dhillon, AHJ Wittenberg, CF Crane, ...
PLoS genetics 7 (6), e1002070, 2011
5972011
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
RM Berka, IV Grigoriev, R Otillar, A Salamov, J Grimwood, I Reid, ...
Nature biotechnology 29 (10), 922-927, 2011
5212011
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
RP De Vries, R Riley, A Wiebenga, G Aguilar-Osorio, S Amillis, ...
Genome biology 18, 1-45, 2017
4912017
The Amsterdam declaration on fungal nomenclature
DL Hawksworth, PW Crous, SA Redhead, DR Reynolds, RA Samson, ...
IMA fungus 2, 105-111, 2011
4902011
Plant-polysaccharide-degrading enzymes from basidiomycetes
J Rytioja, K Hildén, J Yuzon, A Hatakka, RP De Vries, MR Mäkelä
Microbiology and Molecular Biology Reviews 78 (4), 614-649, 2014
4632014
The Transcriptional Activator XlnR Regulates Both Xylanolytic and Endoglucanase Gene Expression inAspergillus niger
NNME van Peij, MMC Gielkens, RP de Vries, J Visser, LH de Graaff
Applied and Environmental Microbiology 64 (10), 3615-3619, 1998
4621998
Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche
E Morin, A Kohler, AR Baker, M Foulongne-Oriol, V Lombard, LG Nagye, ...
Proceedings of the National Academy of Sciences 109 (43), 17501-17506, 2012
4562012
Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire
CA Lévesque, H Brouwer, L Cano, JP Hamilton, C Holt, E Huitema, ...
Genome biology 11, 1-22, 2010
4422010
Growing a circular economy with fungal biotechnology: a white paper
V Meyer, EY Basenko, JP Benz, GH Braus, MX Caddick, M Csukai, ...
Fungal biology and biotechnology 7 (1), 5, 2020
3812020
The genome sequence of the model ascomycete fungus Podospora anserina
E Espagne, O Lespinet, F Malagnac, C Da Silva, O Jaillon, BM Porcel, ...
Genome biology 9, 1-22, 2008
3602008
Synergy between enzymes from Aspergillus involved in the degradation of plant cell wall polysaccharides
RP De Vries, HCM Kester, CH Poulsen, JAE Benen, J Visser
Carbohydrate research 327 (4), 401-410, 2000
3442000
Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis
E Fernandez-Fueyo, FJ Ruiz-Dueñas, P Ferreira, D Floudas, DS Hibbett, ...
Proceedings of the National Academy of Sciences 109 (14), 5458-5463, 2012
3352012
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