|Timing the ancestor of the HIV-1 pandemic strains|
B Korber, M Muldoon, J Theiler, F Gao, R Gupta, A Lapedes, BH Hahn, ...
science 288 (5472), 1789-1796, 2000
|Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission|
CA Derdeyn, JM Decker, F Bibollet-Ruche, JL Mokili, M Muldoon, ...
Science 303 (5666), 2019-2022, 2004
|Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys|
DH Barouch, KL O'brien, NL Simmons, SL King, P Abbink, LF Maxfield, ...
Nature medicine 16 (3), 319-323, 2010
|Phenotypic properties of transmitted founder HIV-1|
NF Parrish, F Gao, H Li, EE Giorgi, HJ Barbian, EH Parrish, L Zajic, ...
Proceedings of the National Academy of Sciences 110 (17), 6626-6633, 2013
|Mosaic vaccines elicit CD8+ T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys|
S Santra, HX Liao, R Zhang, M Muldoon, S Watson, W Fischer, J Theiler, ...
Nature medicine 16 (3), 324-328, 2010
|Maternal HIV-1 viral load and vertical transmission of infection: the Ariel Project for the prevention of HIV transmission from mother to infant|
Y Cao, P Krogstad, BT Korber, RA Koup, M Muldoon, C Macken, JL Song, ...
Nature medicine 3 (5), 549-552, 1997
|The small world of corporate boards|
MJ Conyon, MR Muldoon
Journal of Business Finance & Accounting 33 (9‐10), 1321-1343, 2006
|Dynamics and processivity of 40S ribosome scanning on mRNA in yeast|
K Berthelot, M Muldoon, L Rajkowitsch, J Hughes, JEG McCarthy
Molecular microbiology 51 (4), 987-1001, 2004
|Linear filters and non‐linear systems|
DS Broomhead, JP Huke, MR Muldoon
Journal of the Royal Statistical Society: Series B (Methodological) 54 (2 …, 1992
|Unique mutational patterns in the envelope α2 amphipathic helix and acquisition of length in gp120 hypervariable domains are associated with resistance to autologous …|
R Rong, S Gnanakaran, JM Decker, F Bibollet-Ruche, J Taylor, ...
Journal of virology 81 (11), 5658-5668, 2007
|Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolution|
K Yusim, M Peeters, OG Pybus, T Bhattacharya, E Delaporte, C Mulanga, ...
Philosophical Transactions of the Royal Society of London. Series B …, 2001
|A centralized gene-based HIV-1 vaccine elicits broad cross-clade cellular immune responses in rhesus monkeys|
S Santra, BT Korber, M Muldoon, DH Barouch, GJ Nabel, F Gao, BH Hahn, ...
Proceedings of the National Academy of Sciences 105 (30), 10489-10494, 2008
|Antigenicity and immunogenicity of transmitted/founder, consensus, and chronic envelope glycoproteins of human immunodeficiency virus type 1|
HX Liao, CY Tsao, SM Alam, M Muldoon, N Vandergrift, BJ Ma, X Lu, ...
Journal of virology 87 (8), 4185-4201, 2013
|Cross-subtype T-cell immune responses induced by a human immunodeficiency virus type 1 group m consensus env immunogen|
EA Weaver, Z Lu, ZT Camacho, F Moukdar, HX Liao, BJ Ma, M Muldoon, ...
Journal of virology 80 (14), 6745-6756, 2006
|Antigenicity and immunogenicity of HIV-1 consensus subtype B envelope glycoproteins|
DL Kothe, JM Decker, Y Li, Z Weng, F Bibollet-Ruche, KP Zammit, ...
Virology 360 (1), 218-234, 2007
|Modelling of congenital nystagmus waveforms produced by saccadic system abnormalities|
DS Broomhead, RA Clement, MR Muldoon, JP Whittle, C Scallan, ...
Biological cybernetics 82 (5), 391-399, 2000
|Breadth of cellular and humoral immune responses elicited in rhesus monkeys by multi-valent mosaic and consensus immunogens|
S Santra, M Muldoon, S Watson, A Buzby, H Balachandran, KR Carlson, ...
Virology 428 (2), 121-127, 2012
|Topology from time series|
MR Muldoon, RS MacKay, JP Huke, DS Broomhead
Physica D: Nonlinear Phenomena 65 (1-2), 1-16, 1993
|Increased sequence diversity coverage improves detection of HIV-specific T cell responses|
N Frahm, DE Kaufmann, K Yusim, M Muldoon, C Kesmir, CH Linde, ...
The Journal of Immunology 179 (10), 6638-6650, 2007
|Interactions among oscillatory pathways in NF-kappa B signaling|
Y Wang, P Paszek, CA Horton, DB Kell, MRH White, DS Broomhead, ...
BMC systems biology 5 (1), 1-11, 2011