Reed A. Cartwright
Reed A. Cartwright
Assistant Professor of Genomics, Evolution, and Bioinformatics, Arizona State University
Verified email at asu.edu - Homepage
Title
Cited by
Cited by
Year
A map of human genome variation from population-scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
72532010
Comparative population genomics of maize domestication and improvement
MB Hufford, X Xu, J Van Heerwaarden, T Pyhäjärvi, JM Chia, ...
Nature genetics 44 (7), 808-811, 2012
6532012
Variation in genome-wide mutation rates within and between human families
DF Conrad, JEM Keebler, MA DePristo, SJ Lindsay, Y Zhang, F Casals, ...
Nature 201, 1, 2011
5512011
The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
2222015
DeNovoGear: de novo indel and point mutation discovery and phasing
A Ramu, MJ Noordam, RS Schwartz, A Wuster, ME Hurles, RA Cartwright, ...
Nature methods 10 (10), 985-987, 2013
1462013
DNA assembly with gaps (Dawg): simulating sequence evolution
RA Cartwright
Bioinformatics 21 (Suppl 3), iii31-iii38, 2005
1402005
Problems and solutions for estimating indel rates and length distributions
RA Cartwright
Molecular biology and evolution 26 (2), 473-480, 2009
692009
The role of gene flow in rapid and repeated evolution of cave‐related traits in Mexican tetra, Astyanax mexicanus
A Herman, Y Brandvain, J Weagley, WR Jeffery, AC Keene, TJY Kono, ...
Molecular ecology 27 (22), 4397-4416, 2018
512018
Logarithmic gap costs decrease alignment accuracy
R Cartwright
BMC bioinformatics 7 (1), 527, 2006
462006
Phylogenomic reconstruction supports supercontinent origins for Leishmania
KM Harkins, RS Schwartz, RA Cartwright, AC Stone
Infection, Genetics and Evolution 38, 101-109, 2016
452016
Whole Genome Sequencing of Field Isolates Reveals Extensive Genetic Diversity in Plasmodium vivax from Colombia
DJ Winter, MA Pacheco, AF Vallejo, RS Schwartz, M Arevalo-Herrera, ...
PLoS neglected tropical diseases 9 (12), e0004252, 2015
392015
Low Base-Substitution Mutation Rate in the Germline Genome of the Ciliate Tetrahymena thermophila
H Long, DJ Winter, AYC Chang, W Sung, SH Wu, M Balboa, ...
Genome biology and evolution 8 (12), 3629-3639, 2016
262016
A toxic mutator and selection alternative to the non-Mendelian RNA cache hypothesis for hothead reversion
L Comai, RA Cartwright
The Plant Cell 17 (11), 2856-2858, 2005
262005
A family-based probabilistic method for capturing de novo mutations from high-throughput short-read sequencing data
RA Cartwright, J Hussin, JEM Keebler, EA Stone, P Awadalla
Statistical applications in genetics and molecular biology 11 (2), 2012
242012
Experimental evolution reveals an effective avenue to release catabolite repression via mutations in XylR
C Sievert, LM Nieves, LA Panyon, T Loeffler, C Morris, RA Cartwright, ...
Proceedings of the National Academy of Sciences 114 (28), 7349-7354, 2017
232017
Frequency-dependent selection with dominance: a window onto the behavior of the mean fitness
MA Asmussen, RA Cartwright, HG Spencer
Genetics 167 (1), 499, 2004
222004
PICS-Ord: unlimited coding of ambiguous regions by pairwise identity and cost scores ordination
R Lücking, BP Hodkinson, A Stamatakis, RA Cartwright
BMC bioinformatics 12 (1), 1-15, 2011
212011
Neutral Evolution of Robustness in Drosophila microRNA Precursors
N Price, RA Cartwright, N Sabath, D Graur, RBR Azevedo
Molecular biology and evolution 28 (7), 2115-2123, 2011
212011
Ngila: global pairwise alignments with logarithmic and affine gap costs
RA Cartwright
Bioinformatics, 2007
202007
A composite genome approach to identify phylogenetically informative data from next-generation sequencing
RS Schwartz, KM Harkins, AC Stone, RA Cartwright
BMC bioinformatics 16 (1), 1-10, 2015
19*2015
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