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Jason Serpa
Jason Serpa
Unknown affiliation
Verified email at proteincentre.com
Title
Cited by
Cited by
Year
An isotopically coded CID-cleavable biotinylated cross-linker for structural proteomics
EV Petrotchenko, JJ Serpa, CH Borchers
Molecular & Cellular Proteomics 10 (2), S1-S8, 2011
1512011
Structural and biochemical characterization of Plasmodium falciparum 12 (Pf12) reveals a unique interdomain organization and the potential for an antiparallel arrangement with Pf41
ML Tonkin, SA Arredondo, BC Loveless, JJ Serpa, KAT Makepeace, ...
Journal of Biological Chemistry 288 (18), 12805-12817, 2013
732013
MeCP2 binds to nucleosome free (linker DNA) regions and to H3K9/H3K27 methylated nucleosomes in the brain
AA Thambirajah, MK Ng, LJ Frehlick, A Li, JJ Serpa, EV Petrotchenko, ...
Nucleic acids research 40 (7), 2884-2897, 2012
672012
Use of proteinase K nonspecific digestion for selective and comprehensive identification of interpeptide cross-links: application to prion proteins
EV Petrotchenko, JJ Serpa, DB Hardie, M Berjanskii, BP Suriyamongkol, ...
Molecular & Cellular Proteomics 11 (7), M111. 013524-1-M111. 013524-13, 2012
632012
Mass spectrometry-based structural proteomics
JJ Serpa, CE Parker, EV Petrotchenko, J Han, J Pan, CH Borchers
European Journal of Mass Spectrometry 18 (2), 251-267, 2012
592012
Use of a combination of isotopically coded cross-linkers and isotopically coded N-terminal modification reagents for selective identification of inter-peptide crosslinks
EV Petrotchenko, JJ Serpa, CH Borchers
Analytical chemistry 82 (3), 817-823, 2010
382010
The prolyl isomerase, FKBP25, interacts with RNA-engaged nucleolin and the pre-60S ribosomal subunit
G Gudavicius, D Dilworth, JJ Serpa, N Sessler, EV Petrotchenko, ...
Rna 20 (7), 1014-1022, 2014
332014
The prolyl isomerase FKBP25 regulates microtubule polymerization impacting cell cycle progression and genomic stability
D Dilworth, G Gudavicius, X Xu, AKJ Boyce, C O’Sullivan, JJ Serpa, ...
Nucleic Acids Research 46 (5), 2459-2478, 2018
272018
Using multiple structural proteomics approaches for the characterization of prion proteins
JJ Serpa, AP Patterson, J Pan, J Han, DS Wishart, EV Petrotchenko, ...
Journal of proteomics 81, 31-42, 2013
252013
Analysis of protein structure by cross-linking combined with mass spectrometry
EV Petrotchenko, KAT Makepeace, JJ Serpa, CH Borchers
Shotgun Proteomics: Methods and Protocols, 447-463, 2014
232014
14N15N DXMSMS Match program for the automated analysis of LC/ESI-MS/MS crosslinking data from experiments using 15N metabolically labeled proteins
EV Petrotchenko, JJ Serpa, KAT Makepeace, NI Brodie, CH Borchers
Journal of proteomics 109, 104-110, 2014
212014
The basic tilted helix bundle domain of the prolyl isomerase FKBP25 is a novel double-stranded RNA binding module
D Dilworth, SK Upadhyay, P Bonnafous, AB Edoo, S Bourbigot, ...
Nucleic Acids Research 45 (20), 11989-12004, 2017
182017
Using isotopically-coded hydrogen peroxide as a surface modification reagent for the structural characterization of prion protein aggregates
JJ Serpa, KAT Makepeace, TH Borchers, DS Wishart, EV Petrotchenko, ...
Journal of proteomics 100, 160-166, 2014
152014
“Out-gel” tryptic digestion procedure for chemical cross-linking studies with mass spectrometric detection
EV Petrotchenko, JJ Serpa, AN Cabecinha, M Lesperance, CH Borchers
Journal of Proteome Research 13 (2), 527-535, 2014
142014
Structure of prion β‐oligomers as determined by short‐distance crosslinking constraint‐guided discrete molecular dynamics simulations
JJ Serpa, KI Popov, EV Petrotchenko, NV Dokholyan, CH Borchers
Proteomics 21 (21-22), 2000298, 2021
102021
Expression and purification of the full murine NPM2 and study of its interaction with protamines and histones
K Ellard, JJ Serpa, EV Petrotchenko, CH Borchers, J Ausió
Biochemistry and Biophysics Reports 6, 165-171, 2016
72016
Comprehensive identification of disulfide bonds using non-specific proteinase K digestion and CID-cleavable crosslinking analysis methodology for Orbitrap LC/ESI-MS/MS data
KAT Makepeace, JJ Serpa, EV Petrotchenko, CH Borchers
Methods 89, 74-78, 2015
52015
Cross‐linking Applications in Structural Proteomics
EV Petrotchenko, JJ Serpa, CH Borchers
Proteomics for Biological Discovery, 175-196, 2019
2019
STRUCTURE DETERMINATION OF NEURODEGENERATIVE MISFOLDED PROTEIN AGGREGATES BY SHORT-DISTANCE CROSSLINKING CONSTRAING-GUIDED DISCRETE MOLECULAR DYNAMICS (CL-DMD)
EVI Petrotchenko, JJ Serpa, KI Popov, N Dokholyan, CH Borchers
VII Съезд Вавиловского общества генетиков и селекционеров, посвященный 100 …, 2019
2019
Structure of prion β-oligomers as determined by structural proteomics
JJ Serpa
2017
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