| Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ... Nature 420 (6915), 563-573, 2002 | 2070 | 2002 |
| Inference of S-system models of genetic networks using a cooperative coevolutionary algorithm S Kimura, K Ide, A Kashihara, M Kano, M Hatakeyama, R Masui, ... Bioinformatics 21 (7), 1154-1163, 2005 | 343 | 2005 |
| A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling M Hatakeyama, S Kimura, T Naka, T Kawasaki, N Yumoto, M Ichikawa, ... Biochemical Journal 373 (2), 451-463, 2003 | 300 | 2003 |
| Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences K Iida, M Seki, T Sakurai, M Satou, K Akiyama, T Toyoda, A Konagaya, ... Nucleic acids research 32 (17), 5096-5103, 2004 | 295 | 2004 |
| Molecular robots with sensors and intelligence M Hagiya, A Konagaya, S Kobayashi, H Saito, S Murata Accounts of chemical research 47 (6), 1681-1690, 2014 | 206 | 2014 |
| Circle formation for oblivious anonymous mobile robots with no common sense of orientation X Défago, A Konagaya Proceedings of the second ACM international workshop on Principles of mobile …, 2002 | 183 | 2002 |
| RARTF: Database and Tools for Complete Sets of Arabidopsis Transcription Factors K Iida, M Seki, T Sakurai, M Satou, K Akiyama, T Toyoda, A Konagaya, ... DNA Research 12 (4), 247-256, 2005 | 181 | 2005 |
| Molecular robotics: A new paradigm for artifacts S Murata, A Konagaya, S Kobayashi, H Saito, M Hagiya New Generation Computing 31, 27-45, 2013 | 161 | 2013 |
| Protein explorer: A petaflops special-purpose computer system for molecular dynamics simulations M Taiji, T Narumi, Y Ohno, N Futatsugi, A Suenaga, N Takada, ... Proceedings of the 2003 ACM/IEEE conference on Supercomputing, 15, 2003 | 132 | 2003 |
| High speed homology search with FPGAs Y Yamaguchi, T Maruyama, A Konagaya Biocomputing 2002, 271-282, 2001 | 132 | 2001 |
| Novel peroxisomal protease Tysnd1 processes PTS1‐and PTS2‐containing enzymes involved in β‐oxidation of fatty acids IV Kurochkin, Y Mizuno, A Konagaya, Y Sakaki, C Schönbach, Y Okazaki The EMBO Journal 26 (3), 835-845, 2007 | 121 | 2007 |
| An effective method for selecting siRNA target sequences in mammalian cells S Takasaki, S Kotani, A Konagaya Cell cycle 3 (6), 788-793, 2004 | 105 | 2004 |
| Automatic quantification of morphological traits via three‐dimensional measurement of Arabidopsis E Kaminuma, N Heida, Y Tsumoto, N Yamamoto, N Goto, N Okamoto, ... The Plant Journal 38 (2), 358-365, 2004 | 91 | 2004 |
| RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome T Sakurai, M Satou, K Akiyama, K Iida, M Seki, T Kuromori, T Ito, ... Nucleic acids research 33 (suppl_1), D647-D650, 2005 | 89 | 2005 |
| A fine-grained parallel genetic algorithm for distributed parallel systems T Maruyama, T Hirose, A Konagaya proceedings of the 5th International Conference on Genetic Algorithms, 184-190, 1993 | 86 | 1993 |
| The chloroplast genome from a lycophyte (microphyllophyte), Selaginella uncinata, has a unique inversion, transpositions and many gene losses S Tsuji, K Ueda, T Nishiyama, M Hasebe, S Yoshikawa, A Konagaya, ... Journal of plant research 120, 281-290, 2007 | 83 | 2007 |
| Depletion force induced collective motion of microtubules driven by kinesin D Inoue, B Mahmot, AMR Kabir, TI Farhana, K Tokuraku, K Sada, ... Nanoscale 7 (43), 18054-18061, 2015 | 79 | 2015 |
| Protein name tagging for biomedical annotation in text K Yamamoto, T Kudo, A Konagaya, Y Matsumoto Proceedings of the ACL 2003 workshop on Natural language processing in …, 2003 | 78 | 2003 |
| Microchromosomal deletions involving SCN1A and adjacent genes in severe myoclonic epilepsy in infancy J Wang, H Kurahashi, A Ishii, T Kojima, M Ohfu, T Inoue, A Ogawa, ... Epilepsia 49 (9), 1528-1534, 2008 | 77 | 2008 |
| Design of a high-speed Prolog machine (HPM) R Nakazaki, A Konagaya, S Habata, H Shimazu, M Umemutra, ... ACM SIGARCH Computer Architecture News 13 (3), 191-197, 1985 | 72 | 1985 |
