Chris Creevey
Chris Creevey
Professor of Computational Biology, Queen’s University Belfast
Verified email at qub.ac.uk - Homepage
Title
Cited by
Cited by
Year
STRING 8—a global view on proteins and their functional interactions in 630 organisms
LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ...
Nucleic acids research 37 (suppl_1), D412-D416, 2009
22732009
Toward automatic reconstruction of a highly resolved tree of life
FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork
Science 311 (5765), 1283, 2006
14872006
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
T Keane, C Creevey, M Pentony, T Naughton, J Mclnerney
BMC evolutionary biology 6 (1), 29, 2006
10242006
eggNOG v4. 0: nested orthology inference across 3686 organisms
S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ...
Nucleic acids research 42 (D1), D231-D239, 2014
3782014
Genome-wide experimental determination of barriers to horizontal gene transfer
R Sorek, Y Zhu, CJ Creevey, MP Francino, P Bork, EM Rubin
Science 318 (5855), 1449, 2007
3642007
Clann: investigating phylogenetic information through supertree analyses
CJ Creevey, JO McInerney
Bioinformatics 21 (3), 390-392, 2005
1982005
The Opisthokonta and the Ecdysozoa may not be clades: stronger support for the grouping of plant and animal than for animal and fungi and stronger support for the Coelomata …
GK Philip, CJ Creevey, JO McInerney
Molecular biology and evolution 22 (5), 1175-1184, 2005
1442005
Genome phylogenies indicate a meaningful α-proteobacterial phylogeny and support a grouping of the mitochondria with the Rickettsiales
DA Fitzpatrick, CJ Creevey, JO McInerney
Molecular biology and evolution 23 (1), 74-85, 2006
1382006
Does a tree–like phylogeny only exist at the tips in the prokaryotes?
CJ Creevey, DA Fitzpatrick, GK Philip, RJ Kinsella, MJ O'Connell, ...
Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004
1282004
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ...
Nature biotechnology 36 (4), 359, 2018
1212018
Determining the culturability of the rumen bacterial microbiome
CJ Creevey, WJ Kelly, G Henderson, SC Leahy
Microbial biotechnology 7 (5), 467-479, 2014
1142014
The shape of supertrees to come: tree shape related properties of fourteen supertree methods
M Wilkinson, JA Cotton, C Creevey, O Eulenstein, SR Harris, FJ Lapointe, ...
Systematic biology 54 (3), 419-431, 2005
1132005
Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication
RJ Kinsella, DA Fitzpatrick, CJ Creevey, JO McInerney
Proceedings of the National Academy of Sciences 100 (18), 10320, 2003
932003
Visualization of multiple alignments, phylogenies and gene family evolution
JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton
Nature methods 7 (3), S16-S25, 2010
902010
RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance
M McCabe, S Waters, D Morris, D Kenny, D Lynn, C Creevey
BMC genomics 13 (1), 193, 2012
802012
Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present, and future
SA Huws, CJ Creevey, LB Oyama, I Mizrahi, SE Denman, M Popova, ...
Frontiers in microbiology 9, 2161, 2018
772018
Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type
CA Carberry, SM Waters, DA Kenny, CJ Creevey
Applied and environmental microbiology 80 (2), 586-594, 2014
702014
Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass
SA Huws, JE Edwards, CJ Creevey, P Rees Stevens, W Lin, SE Girdwood, ...
FEMS microbiology ecology 92 (1), fiv137, 2016
602016
Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer
CJ Creevey, T Doerks, DA Fitzpatrick, J Raes, P Bork
PloS one 6 (8), e22099, 2011
582011
An algorithm for detecting directional and non-directional positive selection, neutrality and negative selection in protein coding DNA sequences
CJ Creevey, JO McInerney
Gene 300 (1-2), 43-51, 2002
572002
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