Chris Creevey
Chris Creevey
Professor of Computational Biology, Queen’s University Belfast
Verified email at qub.ac.uk - Homepage
TitleCited byYear
STRING 8—a global view on proteins and their functional interactions in 630 organisms
LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ...
Nucleic acids research 37 (suppl_1), D412-D416, 2009
21922009
Toward automatic reconstruction of a highly resolved tree of life
FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork
Science 311 (5765), 1283, 2006
14432006
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
T Keane, C Creevey, M Pentony, T Naughton, J Mclnerney
BMC evolutionary biology 6 (1), 29, 2006
9832006
eggNOG v4. 0: nested orthology inference across 3686 organisms
S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ...
Nucleic acids research 42 (D1), D231-D239, 2014
3502014
Genome-wide experimental determination of barriers to horizontal gene transfer
R Sorek, Y Zhu, CJ Creevey, MP Francino, P Bork, EM Rubin
Science 318 (5855), 1449, 2007
3462007
Clann: investigating phylogenetic information through supertree analyses
CJ Creevey, JO McInerney
Bioinformatics 21 (3), 390-392, 2005
1942005
The Opisthokonta and the Ecdysozoa may not be clades: stronger support for the grouping of plant and animal than for animal and fungi and stronger support for the Coelomata …
GK Philip, CJ Creevey, JO McInerney
Molecular biology and evolution 22 (5), 1175-1184, 2005
1442005
Genome phylogenies indicate a meaningful α-proteobacterial phylogeny and support a grouping of the mitochondria with the Rickettsiales
DA Fitzpatrick, CJ Creevey, JO McInerney
Molecular biology and evolution 23 (1), 74-85, 2006
1322006
Does a tree–like phylogeny only exist at the tips in the prokaryotes?
CJ Creevey, DA Fitzpatrick, GK Philip, RJ Kinsella, MJ O'Connell, ...
Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004
1262004
The shape of supertrees to come: tree shape related properties of fourteen supertree methods
M Wilkinson, JA Cotton, C Creevey, O Eulenstein, SR Harris, FJ Lapointe, ...
Systematic biology 54 (3), 419-431, 2005
1092005
Determining the culturability of the rumen bacterial microbiome
CJ Creevey, WJ Kelly, G Henderson, SC Leahy
Microbial biotechnology 7 (5), 467-479, 2014
1062014
Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication
RJ Kinsella, DA Fitzpatrick, CJ Creevey, JO McInerney
Proceedings of the National Academy of Sciences 100 (18), 10320, 2003
892003
Visualization of multiple alignments, phylogenies and gene family evolution
JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton
Nature methods 7 (3), S16-S25, 2010
872010
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ...
Nature biotechnology 36 (4), 359, 2018
812018
RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance
M McCabe, S Waters, D Morris, D Kenny, D Lynn, C Creevey
BMC genomics 13 (1), 193, 2012
752012
Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type
CA Carberry, SM Waters, DA Kenny, CJ Creevey
Appl. Environ. Microbiol. 80 (2), 586-594, 2014
632014
Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer
CJ Creevey, T Doerks, DA Fitzpatrick, J Raes, P Bork
PloS one 6 (8), e22099, 2011
572011
An algorithm for detecting directional and non-directional positive selection, neutrality and negative selection in protein coding DNA sequences
CJ Creevey, JO McInerney
Gene 300 (1-2), 43-51, 2002
572002
AQUA: automated quality improvement for multiple sequence alignments
J Muller, CJ Creevey, JD Thompson, D Arendt, P Bork
Bioinformatics 26 (2), 263-265, 2010
552010
Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass
SA Huws, JE Edwards, CJ Creevey, P Rees Stevens, W Lin, SE Girdwood, ...
FEMS microbiology ecology 92 (1), fiv137, 2016
482016
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