| Disentangling interactions in the microbiome: a network perspective M Layeghifard, DM Hwang, DS Guttman Trends in microbiology 25 (3), 217-228, 2017 | 647 | 2017 |
| Seasonal community succession of the phyllosphere microbiome JK Copeland, L Yuan, M Layeghifard, PW Wang, DS Guttman Molecular Plant-Microbe Interactions 28 (3), 274-285, 2015 | 305 | 2015 |
| An extracellular network of Arabidopsis leucine-rich repeat receptor kinases E Smakowska-Luzan, GA Mott, K Parys, M Stegmann, TC Howton, ... Nature 553, 342–346, 2018 | 255 | 2018 |
| Rearrangement bursts generate canonical gene fusions in bone and soft tissue tumors ND Anderson, R de Borja, MD Young, F Fuligni, A Rosic, ND Roberts, ... Science 361 (6405), eaam8419, 2018 | 148 | 2018 |
| A slipped-CAG DNA-binding small molecule induces trinucleotide-repeat contractions in vivo M Nakamori, GB Panigrahi, S Lanni, T Gall-Duncan, H Hayakawa, ... Nature Genetics 52 (2), 146-159, 2020 | 120 | 2020 |
| Microbiome networks and change-point analysis reveal key community changes associated with cystic fibrosis pulmonary exacerbations M Layeghifard, H Li, PW Wang, SL Donaldson, B Coburn, ST Clark, ... npj Biofilms and Microbiomes 5 (1), 4, 2019 | 70 | 2019 |
| A new indirect multi-step-ahead prediction model for a long-term hydrologic prediction CT Cheng, JX Xie, KW Chau, M Layeghifard Journal of hydrology 361 (1-2), 118-130, 2008 | 59 | 2008 |
| Constructing and analyzing microbiome networks in R M Layeghifard, DM Hwang, DS Guttman Microbiome Analysis: Methods and Protocols, 243-266, 2018 | 46 | 2018 |
| Lineage-defined leiomyosarcoma subtypes emerge years before diagnosis and determine patient survival ND Anderson, Y Babichev, F Fuligni, F Comitani, M Layeghifard, ... Nature Communications 12 (1), 4496, 2021 | 36 | 2021 |
| The clinical utility of integrative genomics in childhood cancer extends beyond targetable mutations A Villani, S Davidson, N Kanwar, WW Lo, Y Li, S Cohen-Gogo, F Fuligni, ... Nature Cancer 4 (2), 203-221, 2023 | 31 | 2023 |
| Spatial and species compositional networks for inferring connectivity patterns in ecological communities M Layeghifard, V Makarenkov, PR Peres‐Neto Global Ecology and Biogeography 24 (6), 718-727, 2015 | 20 | 2015 |
| Epidemiology of Clonal Pseudomonas aeruginosa Infection in a Canadian Cystic Fibrosis Population MA Middleton*, M Layeghifard*, M Klingel, S Stanojevic, YCW Yau, ... Annals of the American Thoracic Society 15 (7), 827-836, 2018 | 16 | 2018 |
| Germline TP53 mutations undergo copy number gain years prior to tumor diagnosis N Light, M Layeghifard, A Attery, V Subasri, M Zatzman, ND Anderson, ... Nature Communications 14 (1), 77, 2023 | 12 | 2023 |
| Using directed phylogenetic networks to retrace species dispersal history M Layeghifard, PR Peres-Neto, V Makarenkov Molecular phylogenetics and evolution 64 (1), 190-197, 2012 | 11 | 2012 |
| BARD1 germline variants induce haploinsufficiency and DNA repair defects in neuroblastoma KRB Michael P Randall, Laura E Egolf, Zalman Vaksman, Minu Samanta, Matthew ... The Journal of the National Cancer Institute, 2023 | 6* | 2023 |
| Inferring explicit weighted consensus networks to represent alternative evolutionary histories M Layeghifard, PR Peres-Neto, V Makarenkov BMC Evolutionary Biology 13, 1-25, 2013 | 6 | 2013 |
| Evolutionary mechanisms underlying the functional divergence of duplicate genes involved in vertebrates' circadian rhythm pathway M Layeghifard, R Rabani, L Pirhaji, B Yakhchali Gene 426 (1-2), 65-71, 2008 | 6 | 2008 |
| Identification of a differential metabolite-based signature in patients with late-stage knee osteoarthritis JS Rockel*, M Layeghifard*, YR Rampersaud, AV Perruccio, ... Osteoarthritis and Cartilage Open, 100258, 2022 | 5 | 2022 |
| Publisher Correction: An extracellular network of Arabidopsis leucine-rich repeat receptor kinases E Smakowska-Luzan, GA Mott, K Parys, M Stegmann, TC Howton, ... Nature 561 (7722), E8-E8, 2018 | 4 | 2018 |
| Association of presurgical circulating MicroRNAs with 1-year postsurgical pain reduction in spine facet osteoarthritis patients with lumbar spinal stenosis S Lively, M Milliot, P Potla, O Espin-Garcia, M Layeghifard, ... Osteoarthritis and Cartilage Open 4 (3), 100283, 2022 | 2 | 2022 |
