Sofia K. Forslund

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Peer BorkEMBLCorreu electrònic verificat a embl.de
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA), Madrid, SpainCorreu electrònic verificat a embl.de
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsCorreu electrònic verificat a imls.uzh.ch
Alex BatemanHead of Protein Sequence Resources, EMBL-EBICorreu electrònic verificat a ebi.ac.uk
Damian SzklarczykSIB Swiss Institute of Bioinformatics / University of ZurichCorreu electrònic verificat a isb-sib.ch
Lars Juhl JensenUniversity of CopenhagenCorreu electrònic verificat a cpr.ku.dk
Robert D. FinnSequence Families Team Leader, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambs, CB10 1SD, UKCorreu electrònic verificat a ebi.ac.uk
Michael Kuhnstaff scientist in the lab of Peer Bork, EMBLCorreu electrònic verificat a embl.de
Shinichi SunagawaETH Zürich; Swiss Institute of BioinformaticsCorreu electrònic verificat a ethz.ch
Alexander RothUniversity of ZurichCorreu electrònic verificat a uzh.ch
Daniel R. MendeAsst. Professor, Amsterdam University Medical Center, University of AmsterdamCorreu electrònic verificat a amsterdamumc.nl
Jens Roat KultimaDanish Competition and Consumer Agency; Bioinformatics and Economic Fraud SpecialistCorreu electrònic verificat a kfst.dk
Toni GabaldonGroup Leader, Institute for Research in Biomedicine (IRB) and Barcelona Supercomputing Centre (BSC)Correu electrònic verificat a crg.es
Manimozhiyan ArumugamAssociate Professor, Faculty of Health and Medical Sciences, University of CopenhagenCorreu electrònic verificat a sund.ku.dk
Chris CreeveyProfessor of Computational Biology, Queen’s University BelfastCorreu electrònic verificat a qub.ac.uk
Barbara HollandSchool of Natural Sciences (Maths), University of Tasmania, HobartCorreu electrònic verificat a utas.edu.au
Korbinian StrimmerDepartment of Mathematics, The University of ManchesterCorreu electrònic verificat a manchester.ac.uk
Dr. Fabian SchreiberMedical Data Scientist, Charite BerlinCorreu electrònic verificat a charite.de
Daniel H. HusonProfessor of Algorithms in Bioinformatics, University of TuebingenCorreu electrònic verificat a uni-tuebingen.de

Sofia K. Forslund

Junior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), Berlin

Correu electrònic verificat a embl.de - Pàgina d'inici

Cardiovascular and metabolic disease systems medicine evolutionary bioinformatics host-microbiome analysis antibiotic resist


Títol Ordena per cites Ordena per any Ordena per títol	Citada per Citada per	Any
The Pfam protein families database M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ... Nucleic acids research 40 (D1), D290-D301, 2012	9337*	2012
STRING v10: protein–protein interaction networks, integrated over the tree of life D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ... Nucleic acids research 43 (D1), D447-D452, 2015	6621	2015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ... Nucleic acids research 44 (D1), D286-D293, 2016	1197	2016
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ... Nature 528 (7581), 262-266, 2015	1044	2015
Human gut microbes impact host serum metabolome and insulin sensitivity HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ... Nature 535 (7612), 376-381, 2016	803	2016
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ... Molecular biology and evolution 34 (8), 2115-2122, 2017	689	2017
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ... Nucleic acids research 38 (suppl_1), D196-D203, 2010	645	2010
Salt-responsive gut commensal modulates TH 17 axis and disease N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ... Nature 551 (7682), 585-589, 2017	417	2017
Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children K Korpela, A Salonen, LJ Virta, RA Kekkonen, K Forslund, P Bork, ... Nature communications 7 (1), 1-8, 2016	406	2016
eggNOG v4. 0: nested orthology inference across 3686 organisms S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ... Nucleic acids research 42 (D1), D231-D239, 2014	406	2014
Country-specific antibiotic use practices impact the human gut resistome K Forslund, S Sunagawa, JR Kultima, DR Mende, M Arumugam, A Typas, ... Genome research 23 (7), 1163-1169, 2013	315	2013
Towards standards for human fecal sample processing in metagenomic studies PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ... Nature biotechnology 35 (11), 1069-1076, 2017	304	2017
Database issue RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ... Nucleic Acids Res 38, 211-222, 2010	213	2010
Standardized benchmarking in the quest for orthologs AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ... Nature methods 13 (5), 425-430, 2016	142	2016
Predicting protein function from domain content K Forslund, ELL Sonnhammer Bioinformatics 24 (15), 1681-1687, 2008	104	2008
MOCAT2: a metagenomic assembly, annotation and profiling framework JR Kultima, LP Coelho, K Forslund, J Huerta-Cepas, SS Li, M Driessen, ... Bioinformatics 32 (16), 2520-2523, 2016	99	2016
Domain tree-based analysis of protein architecture evolution K Forslund, A Henricson, V Hollich, ELL Sonnhammer Molecular biology and evolution 25 (2), 254-264, 2008	90	2008
QNet: an agglomerative method for the construction of phylogenetic networks from weighted quartets S Grünewald, K Forslund, A Dress, V Moulton Molecular Biology and Evolution 24 (2), 532-538, 2007	72	2007
Metagenomic insights into the human gut resistome and the forces that shape it K Forslund, S Sunagawa, LP Coelho, P Bork Bioessays 36 (3), 316-329, 2014	62	2014
Domain architecture conservation in orthologs K Forslund, I Pekkari, ELL Sonnhammer BMC bioinformatics 12 (1), 1-14, 2011	58	2011

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