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Alan R. Pacheco
Alan R. Pacheco
Dirección de correo verificada de biol.ethz.ch
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A linked organ-on-chip model of the human neurovascular unit reveals the metabolic coupling of endothelial and neuronal cells
BM Maoz, A Herland, EA FitzGerald, T Grevesse, C Vidoudez, ...
Nature biotechnology 36 (9), 865, 2018
3672018
Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems
AR Pacheco, M Moel, D Segrè
Nature communications 10 (1), 103, 2019
2452019
A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS)
I Dukovski, D Bajić, JM Chacón, M Quintin, JCC Vila, S Sulheim, ...
Nature Protocols, 1-58, 2021
95*2021
A multidimensional perspective on microbial interactions
AR Pacheco, D Segrè
FEMS Microbiology Letters, 2019
742019
Reproducibility of Fluorescent Expression from Engineered Biological Constructs in E. coli
J Beal, T Haddock-Angelli, M Gershater, K De Mora, M Lizarazo, ...
PloS one 11 (3), e0150182, 2016
532016
Non-additive microbial community responses to environmental complexity
AR Pacheco, ML Osborne, D Segrè
Nature communications 12 (1), 2365, 2021
51*2021
Metabolic interaction models recapitulate leaf microbiota ecology
M Schäfer, AR Pacheco, R Künzler, M Bortfeld-Miller, CM Field, E Vayena, ...
Science 381 (6653), eadf5121, 2023
162023
Enhancing Microbiome Research through Genome-Scale Metabolic Modeling
NYD Ankrah, DB Bernstein, M Biggs, M Carey, M Engevik, ...
mSystems 6 (6), e00599-21, 2021
162021
An evolutionary algorithm for designing microbial communities via environmental modification
AR Pacheco, D Segrè
Journal of the Royal Society Interface 18 (179), 20210348, 2021
122021
Toward FAIR Representations of Microbial Interactions
AR Pacheco, C Pauvert, D Kishore, D Segrè
Msystems 7 (5), e00659-22, 2022
72022
Stoichiometric modeling of artificial string chemistries reveals constraints on metabolic network structure
D Moyer, AR Pacheco, DB Bernstein, D Segrè
Journal of Molecular Evolution 89 (7), 472-483, 2021
6*2021
From microbiome composition to functional engineering, one step at a time
SD Burz, S Causevic, A Dal Co, M Dmitrijeva, P Engel, D Garrido-Sanz, ...
Microbiology and Molecular Biology Reviews 87 (4), e00063-23, 2023
52023
Resolving metabolic interaction mechanisms in plant microbiomes
AR Pacheco, JA Vorholt
Current Opinion in Microbiology 74, 102317, 2023
42023
Environmental modulation of microbial ecosystems
AR Pacheco
2021
BBF RFC 94: Type IIS Assembly for Bacterial Transcriptional Units: A Standardized Assembly Method for Building Bacterial Transcriptional Units Using the Type IIS Restriction …
TL Haddock, DM Densmore, E Appleton, S Carr, S Iverson, M De Freitas, ...
2015
Towards integrated rhizosphere microbial community modeling through bottom-up COMETS genome-scale metabolic simulations and top-down data analysis
I Dukovski, D Segrè
Genetic Systems Engineering
P Vaidyanathan, E Appleton, C Madsen, CI Vasile, A Pacheco, I Haghighi, ...
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Artículos 1–17