| An integrated genomic analysis of human glioblastoma multiforme DW Parsons, S Jones, X Zhang, JCH Lin, RJ Leary, P Angenendt, ... science 321 (5897), 1807-1812, 2008 | 6842 | 2008 |
| Core signaling pathways in human pancreatic cancers revealed by global genomic analyses S Jones, X Zhang, DW Parsons, JCH Lin, RJ Leary, P Angenendt, ... science 321 (5897), 1801-1806, 2008 | 4610 | 2008 |
| The genomic landscapes of human breast and colorectal cancers LD Wood, DW Parsons, S Jones, J Lin, T Sjoblom, RJ Leary, D Shen, ... Science 318 (5853), 1108-1113, 2007 | 3752 | 2007 |
| Molecular definition of breast tumor heterogeneity M Shipitsin, LL Campbell, P Argani, S Weremowicz, N Bloushtain-Qimron, ... Cancer cell 11 (3), 259-273, 2007 | 1720 | 2007 |
| The JAK2/STAT3 signaling pathway is required for growth of CD44+CD24– stem cell–like breast cancer cells in human tumors LLC Marotta, V Almendro, A Marusyk, M Shipitsin, J Schemme, SR Walker, ... The Journal of clinical investigation 121 (7), 2723-2735, 2011 | 976 | 2011 |
| The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models Nature biotechnology 28 (8), 827-838, 2010 | 849 | 2010 |
| The genetic landscape of the childhood cancer medulloblastoma DW Parsons, M Li, X Zhang, S Jones, RJ Leary, JCH Lin, SM Boca, ... science 331 (6016), 435-439, 2011 | 809 | 2011 |
| Regulation of in situ to invasive breast carcinoma transition M Hu, J Yao, DK Carroll, S Weremowicz, H Chen, D Carrasco, ... Cancer cell 13 (5), 394-406, 2008 | 616 | 2008 |
| The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ... Nature biotechnology 32 (9), 926-932, 2014 | 518 | 2014 |
| A meiotic recombination checkpoint controlled by mitotic checkpoint genes D Lydall, Y Nikolsky, DK Bishop, T Weinert Nature 383 (6603), 840-843, 1996 | 404 | 1996 |
| Comparison of RNA-seq and microarray-based models for clinical endpoint prediction W Zhang, Y Yu, F Hertwig, J Thierry-Mieg, W Zhang, D Thierry-Mieg, ... Genome biology 16, 1-12, 2015 | 395 | 2015 |
| Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers RJ Leary, JC Lin, J Cummins, S Boca, LD Wood, DW Parsons, S Jones, ... Proceedings of the National Academy of Sciences 105 (42), 16224-16229, 2008 | 385 | 2008 |
| A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages Y Yu, JC Fuscoe, C Zhao, C Guo, M Jia, T Qing, DI Bannon, L Lancashire, ... Nature communications 5 (1), 1-11, 2014 | 360 | 2014 |
| Pathway mapping tools for analysis of high content data S Ekins, Y Nikolsky, A Bugrim, E Kirillov, T Nikolskaya High content screening: A powerful approach to systems cell biology and drug …, 2006 | 321 | 2006 |
| Cell type-specific DNA methylation patterns in the human breast N Bloushtain-Qimron, J Yao, EL Snyder, M Shipitsin, LL Campbell, ... Proceedings of the National Academy of Sciences 105 (37), 14076-14081, 2008 | 286 | 2008 |
| Atherosclerosis and liver inflammation induced by increased dietary cholesterol intake: a combined transcriptomics and metabolomics analysis R Kleemann, L Verschuren, MJ van Erk, Y Nikolsky, NHP Cnubben, ... Genome biology 8, 1-16, 2007 | 279 | 2007 |
| Early prediction of drug metabolism and toxicity: systems biology approach and modeling A Bugrim, T Nikolskaya, Y Nikolsky Drug discovery today 9 (3), 127-135, 2004 | 256 | 2004 |
| Drug target prediction and repositioning using an integrated network-based approach D Emig, A Ivliev, O Pustovalova, L Lancashire, S Bureeva, Y Nikolsky, ... PloS one 8 (4), e60618, 2013 | 253 | 2013 |
| Effect of training-sample size and classification difficulty on the accuracy of genomic predictors V Popovici, W Chen, BD Gallas, C Hatzis, W Shi, FW Samuelson, ... Breast Cancer Research 12, 1-13, 2010 | 244 | 2010 |
| Techniques: application of systems biology to absorption, distribution, metabolism, excretion and toxicity S Ekins, Y Nikolsky, T Nikolskaya Trends in pharmacological sciences 26 (4), 202-209, 2005 | 240 | 2005 |
