| The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ... Science 336 (6089), 1715-1719, 2012 | 1755 | 2012 |
| Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche E Morin, A Kohler, AR Baker, M Foulongne-Oriol, V Lombard, LG Nagye, ... Proceedings of the National Academy of Sciences 109 (43), 17501-17506, 2012 | 442 | 2012 |
| Bacillus subtilis attachment to Aspergillus niger hyphae results in mutually altered metabolism I Benoit, MH van den Esker, A Patyshakuliyeva, DJ Mattern, F Blei, ... Environmental microbiology 17 (6), 2099-2113, 2015 | 135 | 2015 |
| The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown A Levasseur, A Lomascolo, O Chabrol, FJ Ruiz-Dueñas, E Boukhris-Uzan, ... BMC genomics 15, 1-24, 2014 | 117 | 2014 |
| Uncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle A Patyshakuliyeva, H Post, M Zhou, E Jurak, AJR Heck, KS Hildén, ... Environmental microbiology 17 (8), 3098-3109, 2015 | 60 | 2015 |
| Improving cellulase production by Aspergillus niger using adaptive evolution A Patyshakuliyeva, M Arentshorst, IE Allijn, AFJ Ram, RP de Vries, ... Biotechnology letters 38, 969-974, 2016 | 45 | 2016 |
| Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus A Patyshakuliyeva, E Jurak, A Kohler, A Baker, E Battaglia, W De Bruijn, ... BMC genomics 14, 1-14, 2013 | 43 | 2013 |
| An improved and reproducible protocol for the extraction of high quality fungal RNA from plant biomass substrates A Patyshakuliyeva, MR Mäkelä, OM Sietiö, RP de Vries, KS Hildén Fungal Genetics and Biology 72, 201-206, 2014 | 31 | 2014 |
| Macroalgae derived fungi have high abilities to degrade algal polymers A Patyshakuliyeva, DL Falkoski, A Wiebenga, K Timmermans, ... Microorganisms 8 (1), 52, 2019 | 30 | 2019 |
| Compost grown Agaricus bisporus lacks the ability to degrade and consume highly substituted xylan fragments E Jurak, A Patyshakuliyeva, RP De Vries, H Gruppen, MA Kabel PloS one 10 (8), e0134169, 2015 | 25 | 2015 |
| The physiology of Agaricus bisporus in semi-commercial compost cultivation appears to be highly conserved among unrelated isolates MVA Pontes, A Patyshakuliyeva, H Post, E Jurak, K Hildén, M Altelaar, ... Fungal Genetics and Biology 112, 12-20, 2018 | 19 | 2018 |
| The current biotechnological status and potential of plant and algal biomass degrading/modifying enzymes from ascomycete fungi RP de Vries, A Patyshakuliyeva, S Garrigues, S Agarwal-Jans Grand challenges in fungal biotechnology, 81-120, 2020 | 16 | 2020 |
| The Paleozoic origin of enzymatic mechanisms for decay of lignin reconstructed using 31 fungal genomes D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ... Science 336 (6089), 1715-1719, 2012 | 9 | 2012 |
| Accumulation of recalcitrant xylan in mushroom-compost is due to a lack of xylan substituent removing enzyme activities of Agaricus bisporus E Jurak, A Patyshakuliyeva, D Kapsokalyvas, L Xing, ... Carbohydrate polymers 132, 359-368, 2015 | 8 | 2015 |
| Biodegradation of carbohydrates during the formation of Agaricus bisporus compost. A Patyshakuliyeva, RP Vries | 2 | 2011 |
| Evolutionary adaptation to generate mutants RP de Vries, R Lubbers, A Patyshakuliyeva, A Wiebenga, I Benoit-Gelber Fungal Genomics: Methods and Protocols, 133-137, 2018 | 1 | 2018 |
| Unraveling the mystery of commercial cultivation of Agaricus bisporus: plant biomass utilization and its effect on mushroom production A Patyshakuliyeva | 1 | 2015 |
| SpataforaJosephBotanyPlantPathologyPaleozoicOriginEnzymatic. pdf D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ... | | 2017 |
| Fate of lignin and substituted xylan during commercial cultivation of Agaricus bisporus M Kabel, E Jurak, A Patyshakuliyeva, R de Vries, H Gruppen Science and cultivation of edible fungi: Proceedings of the XIXth …, 2016 | | 2016 |
| How (post-) genomic insights can provide new leads for improvements of mushroom cultivation A Patyshakuliyeva, H Post, M Zhou, E Jurak, A Heck, KS Hildén, M Kabel, ... Science and Cultivation of Edible Fungi: Proceedings of the International …, 2016 | | 2016 |
