Simon Jarman
Simon Jarman
Professor of Environmental Genomics, Curtin University
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Who is eating what: diet assessment using next generation sequencing
F Pompanon, BE Deagle, WOC Symondson, DS Brown, SN Jarman, ...
Molecular ecology 21 (8), 1931-1950, 2012
DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match
BE Deagle, SN Jarman, E Coissac, F Pompanon, P Taberlet
Biology letters 10 (9), 20140562, 2014
Blocking primers to enhance PCR amplification of rare sequences in mixed samples–a case study on prey DNA in Antarctic krill stomachs
H Vestheim, SN Jarman
Frontiers in zoology 5, 1-11, 2008
Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces
BE Deagle, R Kirkwood, SN Jarman
Molecular ecology 18 (9), 2022-2038, 2009
Quantification of damage in DNA recovered from highly degraded samples–a case study on DNA in faeces
BE Deagle, JP Eveson, SN Jarman
Frontiers in zoology 3, 1-10, 2006
Molecular scatology as a tool to study diet: analysis of prey DNA in scats from captive Steller sea lions
BE Deagle, DJ Tollit, SN Jarman, MA Hindell, AW Trites, NJ Gales
Molecular Ecology 14 (6), 1831-1842, 2005
DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions
L Zinger, A Bonin, IG Alsos, M Bálint, H Bik, F Boyer, AA Chariton, S Creer, ...
Molecular ecology 28 (8), 1857-1862, 2019
Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?
BE Deagle, A Chiaradia, J McInnes, SN Jarman
Conservation Genetics 11, 2039-2048, 2010
Studying seabird diet through genetic analysis of faeces: a case study on macaroni penguins (Eudyptes chrysolophus)
BE Deagle, NJ Gales, K Evans, SN Jarman, S Robinson, R Trebilco, ...
PLoS One 2 (9), e831, 2007
Quantifying sequence proportions in a DNA‐based diet study using Ion Torrent amplicon sequencing: which counts count?
BE Deagle, AC Thomas, AK Shaffer, AW Trites, SN Jarman
Molecular Ecology Resources 13 (4), 620-633, 2013
Group‐specific polymerase chain reaction for DNA‐based analysis of species diversity and identity in dietary samples
SN Jarman, BE Deagle, NJ Gales
Molecular Ecology 13 (5), 1313-1322, 2004
Southern Ocean iron fertilization by baleen whales and Antarctic krill
S Nicol, A Bowie, S Jarman, D Lannuzel, KM Meiners, P Van Der Merwe
Fish and fisheries 11 (2), 203-209, 2010
Epigenetic estimation of age in humpback whales
AM Polanowski, J Robbins, D Chandler, SN Jarman
Molecular ecology resources 14 (5), 976-987, 2014
Phylogenomic resolution of the cetacean tree of life using target sequence capture
MR McGowen, G Tsagkogeorga, S Álvarez-Carretero, M Dos Reis, ...
Systematic biology 69 (3), 479-501, 2020
A DNA‐based method for identification of krill species and its application to analysing the diet of marine vertebrate predators
SN Jarman, NJ Gales, M Tierney, PC Gill, NG Elliott
Molecular Ecology 11 (12), 2679-2690, 2002
Oligonucleotide primers for PCR amplification of coelomate introns
SN Jarman, RD Ward, NG Elliott
Marine Biotechnology 4, 347-355, 2002
Adélie penguin population diet monitoring by analysis of food DNA in scats
SN Jarman, JC McInnes, C Faux, AM Polanowski, J Marthick, BE Deagle, ...
PLoS One 8 (12), e82227, 2013
Environmental DNA metabarcoding studies are critically affected by substrate selection
A Koziol, M Stat, T Simpson, S Jarman, JD DiBattista, ES Harvey, ...
Molecular Ecology Resources 19 (2), 366-376, 2019
Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias
AC Thomas, SN Jarman, KH Haman, AW Trites, BE Deagle
Molecular ecology 23 (15), 3706-3718, 2014
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates
JC McInnes, R Alderman, BE Deagle, MA Lea, B Raymond, SN Jarman
Methods in Ecology and Evolution 8 (2), 192-202, 2017
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