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Ronny Lorenz
Ronny Lorenz
Unknown affiliation
Verified email at tbi.univie.ac.at
Title
Cited by
Cited by
Year
ViennaRNA Package 2.0
R Lorenz, SH Bernhart, C Höner zu Siederdissen, H Tafer, C Flamm, ...
Algorithms for molecular biology 6 (1), 1-14, 2011
34432011
The vienna RNA websuite
AR Gruber, R Lorenz, SH Bernhart, R Neuböck, IL Hofacker
Nucleic acids research 36 (suppl_2), W70-W74, 2008
18572008
The ViennaRNA web services
AR Gruber, SH Bernhart, R Lorenz
RNA bioinformatics, 307-326, 2015
1102015
Predicting RNA secondary structures from sequence and probing data
R Lorenz, MT Wolfinger, A Tanzer, IL Hofacker
Methods 103, 86-98, 2016
972016
SHAPE directed RNA folding
R Lorenz, D Luntzer, IL Hofacker, PF Stadler, MT Wolfinger
Bioinformatics 32 (1), 145-147, 2016
922016
ViennaRNA Package 2.0
PF Stadler, IL Hofacker, R Lorenz, SH Bernhart, H Tafer, C Siederdissen
Algorithms, 2011
812011
RNA folding with hard and soft constraints
R Lorenz, IL Hofacker, PF Stadler
Algorithms for Molecular Biology 11 (1), 1-13, 2016
682016
TSSAR: TSS annotation regime for dRNA-seq data
F Amman, MT Wolfinger, R Lorenz, IL Hofacker, PF Stadler, S Findeiß
BMC bioinformatics 15 (1), 1-11, 2014
602014
Asymmetry of stem cell fate and the potential impact of the niche
I Roeder, R Lorenz
Stem cell reviews 2 (3), 171-180, 2006
532006
Höner zu Siederdissen C et al (2011) ViennaRNA package 2.0
R Lorenz, SH Bernhart
Algorithms Mol Biol 6, 26, 0
51
Model-free RNA sequence and structure alignment informed by SHAPE probing reveals a conserved alternate secondary structure for 16S rRNA
CA Lavender, R Lorenz, G Zhang, R Tamayo, IL Hofacker, KM Weeks
PLOS computational biology 11 (5), e1004126, 2015
432015
2D meets 4G: G-quadruplexes in RNA secondary structure prediction
R Lorenz, SH Bernhart, J Qin, CH zu Siederdissen, A Tanzer, F Amman, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (4 …, 2013
402013
Design criteria for synthetic riboswitches acting on transcription
M Wachsmuth, G Domin, R Lorenz, R Serfling, S Findeiß, PF Stadler, ...
RNA biology 12 (2), 221-231, 2015
392015
Animal snoRNAs and scaRNAs with exceptional structures
M Marz, AR Gruber, C Höner zu Siederdissen, F Amman, S Badelt, ...
RNA biology 8 (6), 938-946, 2011
382011
Nematode sbRNAs: homologs of vertebrate Y RNAs
I Boria, AR Gruber, A Tanzer, SH Bernhart, R Lorenz, MM Mueller, ...
Journal of molecular evolution 70 (4), 346-358, 2010
382010
2D projections of RNA folding landscapes
R Lorenz, C Flamm, IL Hofacker
German conference on bioinformatics 2009, 2009
362009
A novel view on stem cell development: analysing the shape of cellular genealogies
I Glauche, R Lorenz, D Hasenclever, I Roeder
Cell proliferation 42 (2), 248-263, 2009
332009
Evolving better RNAfold structure prediction
WB Langdon, J Petke, R Lorenz
European Conference on Genetic Programming, 220-236, 2018
302018
RNA modifications in structure prediction–Status quo and future challenges
A Tanzer, IL Hofacker, R Lorenz
Methods 156, 32-39, 2019
242019
Predicting RNA structure: advances and limitations
IL Hofacker, R Lorenz
RNA Folding, 1-19, 2014
222014
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