The systems biology graphical notation N Le Novere, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ... Nature biotechnology 27 (8), 735-741, 2009 | 869 | 2009 |
Integrative analysis of cell cycle control in budding yeast KC Chen, L Calzone, A Csikasz-Nagy, FR Cross, B Novak, JJ Tyson Molecular biology of the cell 15 (8), 3841-3862, 2004 | 720 | 2004 |
BIOCHAM: an environment for modeling biological systems and formalizing experimental knowledge L Calzone, F Fages, S Soliman Bioinformatics 22 (14), 1805-1807, 2006 | 290 | 2006 |
Mathematical modelling of cell-fate decision in response to death receptor engagement L Calzone, L Tournier, S Fourquet, D Thieffry, B Zhivotovsky, E Barillot, ... PLoS Comput Biol 6 (3), e1000702, 2010 | 173 | 2010 |
Integrative modelling of the influence of MAPK network on cancer cell fate decision L Grieco, L Calzone, I Bernard-Pierrot, F Radvanyi, B Kahn-Perles, ... PLoS Comput Biol 9 (10), e1003286, 2013 | 143 | 2013 |
A comprehensive modular map of molecular interactions in RB/E2F pathway L Calzone, A Gelay, A Zinovyev, F Radvanyi, E Barillot Molecular systems biology 4 (1), 0174, 2008 | 143 | 2008 |
Machine learning biochemical networks from temporal logic properties L Calzone, N Chabrier-Rivier, F Fages, S Soliman Transactions on Computational Systems Biology VI, 68-94, 2006 | 140 | 2006 |
Computational systems biology of cancer E Barillot, L Calzone, P Hupe, JP Vert, A Zinovyev CRC Press, 2012 | 133 | 2012 |
Atlas of Cancer Signalling Network: a systems biology resource for integrative analysis of cancer data with Google Maps I Kuperstein, E Bonnet, HA Nguyen, D Cohen, E Viara, L Grieco, ... Oncogenesis 4 (7), e160-e160, 2015 | 108 | 2015 |
BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks A Zinovyev, E Viara, L Calzone, E Barillot Bioinformatics 24 (6), 876-877, 2008 | 107 | 2008 |
Mathematical modelling of molecular pathways enabling tumour cell invasion and migration DPA Cohen, L Martignetti, S Robine, E Barillot, A Zinovyev, L Calzone PLoS Comput Biol 11 (11), e1004571, 2015 | 79 | 2015 |
A modeling approach to explain mutually exclusive and co-occurring genetic alterations in bladder tumorigenesis E Remy, S Rebouissou, C Chaouiya, A Zinovyev, F Radvanyi, L Calzone Cancer research 75 (19), 4042-4052, 2015 | 75 | 2015 |
Continuous time Boolean modeling for biological signaling: application of Gillespie algorithm G Stoll, E Viara, E Barillot, L Calzone BMC systems biology 6 (1), 1-18, 2012 | 72 | 2012 |
NaviCell: a web-based environment for navigation, curation and maintenance of large molecular interaction maps I Kuperstein, DPA Cohen, S Pook, E Viara, L Calzone, E Barillot, ... BMC systems biology 7 (1), 1-13, 2013 | 60 | 2013 |
Integrative multi-omics module network inference with Lemon-Tree E Bonnet, L Calzone, T Michoel PLoS Comput Biol 11 (2), e1003983, 2015 | 59 | 2015 |
BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats E Bonnet, L Calzone, D Rovera, G Stoll, E Barillot, A Zinovyev BMC systems biology 7 (1), 1-16, 2013 | 57 | 2013 |
MaBoSS 2.0: an environment for stochastic Boolean modeling G Stoll, B Caron, E Viara, A Dugourd, A Zinovyev, A Naldi, G Kroemer, ... Bioinformatics 33 (14), 2226-2228, 2017 | 52 | 2017 |
Dynamical modeling of syncytial mitotic cycles in Drosophila embryos L Calzone, D Thieffry, JJ Tyson, B Novak Molecular systems biology 3 (1), 131, 2007 | 52 | 2007 |
Aberrant ERBB4-SRC signaling as a hallmark of group 4 medulloblastoma revealed by integrative phosphoproteomic profiling A Forget, L Martignetti, S Puget, L Calzone, S Brabetz, D Picard, ... Cancer cell 34 (3), 379-395. e7, 2018 | 47 | 2018 |
On circuit functionality in boolean networks JP Comet, M Noual, A Richard, J Aracena, L Calzone, J Demongeot, ... Bulletin of mathematical biology 75 (6), 906-919, 2013 | 37 | 2013 |