| Circular RNAs are a large class of animal RNAs with regulatory potency S Memczak, M Jens, A Elefsinioti, F Torti, J Krueger, A Rybak, L Maier, ... Nature 495 (7441), 333-338, 2013 | 7223 | 2013 |
| miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades MR Friedländer, SD Mackowiak, N Li, W Chen, N Rajewsky Nucleic acids research 40 (1), 37-52, 2012 | 2719 | 2012 |
| Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ... Science 330 (6012), 1775-1787, 2010 | 1095 | 2010 |
| Identification of small ORF s in vertebrates using ribosome footprinting and evolutionary conservation AA Bazzini, TG Johnstone, R Christiano, SD Mackowiak, B Obermayer, ... The EMBO journal 33 (9), 981-993, 2014 | 661 | 2014 |
| The landscape of C. elegans 3′ UTRs M Mangone, AP Manoharan, D Thierry-Mieg, J Thierry-Mieg, T Han, ... Science 329 (5990), 432-435, 2010 | 319 | 2010 |
| doRiNA: a database of RNA interactions in post-transcriptional regulation G Anders, SD Mackowiak, M Jens, J Maaskola, A Kuntzagk, N Rajewsky, ... Nucleic acids research 40 (D1), D180-D186, 2012 | 231 | 2012 |
| Extensive identification and analysis of conserved small ORFs in animals SD Mackowiak, H Zauber, C Bielow, D Thiel, K Kutz, L Calviello, ... Genome biology 16, 1-21, 2015 | 217 | 2015 |
| De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics C Adamidi, Y Wang, D Gruen, G Mastrobuoni, X You, D Tolle, M Dodt, ... Genome research 21 (7), 1193-1200, 2011 | 136 | 2011 |
| Unblending of transcriptional condensates in human repeat expansion disease S Basu, SD Mackowiak, H Niskanen, D Knezevic, V Asimi, S Grosswendt, ... Cell 181 (5), 1062-1079. e30, 2020 | 130 | 2020 |
| Identification of novel and known miRNAs in deep‐sequencing data with miRDeep2 SD Mackowiak Current protocols in bioinformatics 36 (1), 12.10. 1-12.10. 15, 2011 | 128 | 2011 |
| Selective Mediator dependence of cell-type-specifying transcription MG Jaeger, B Schwalb, SD Mackowiak, T Velychko, A Hanzl, H Imrichova, ... Nature genetics 52 (7), 719-727, 2020 | 87 | 2020 |
| Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery N Li, X You, T Chen, SD Mackowiak, MR Friedländer, M Weigt, H Du, ... Nucleic acids research 41 (6), 3619-3634, 2013 | 67 | 2013 |
| Specific microRNAs Regulate Heat Stress Responses in Caenorhabditis elegans C Nehammer, A Podolska, SD Mackowiak, K Kagias, R Pocock Scientific reports 5 (1), 8866, 2015 | 60 | 2015 |
| Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells M Tarbier, SD Mackowiak, J Frade, S Catuara-Solarz, I Biryukova, ... Nature communications 11 (1), 5445, 2020 | 23 | 2020 |
| The SWI/SNF subunit BRG1 affects alternative splicing by changing RNA binding factor interactions with nascent RNA A Gañez-Zapater, SD Mackowiak, Y Guo, M Tarbier, A Jordán-Pla, ... Molecular Genetics and Genomics 297 (2), 463-484, 2022 | 15 | 2022 |
| An inventory of yeast proteins associated with nucleolar and ribosomal components E Staub, S Mackowiak, M Vingron Genome Biology 7, 1-21, 2006 | 13 | 2006 |
| A fluorophore fusion construct of human profilin I with non-compromised poly (L-proline) binding capacity suitable for Imaging M Nejedla, Z Li, AE Masser, M Biancospino, M Spiess, SD Mackowiak, ... Journal of Molecular Biology 429 (7), 964-976, 2017 | 10 | 2017 |
| Global hypomethylation in childhood asthma identified by genome‐wide DNA‐methylation sequencing preferentially affects enhancer regions L Thürmann, M Klös, SD Mackowiak, M Bieg, T Bauer, N Ishaque, ... Allergy 78 (6), 1489-1506, 2023 | 5 | 2023 |
| SSAM-lite: A light-weight web app for rapid analysis of spatially resolved transcriptomics data S Tiesmeyer, S Sahay, N Müller-Bötticher, R Eils, SD Mackowiak, ... Frontiers in Genetics 13, 785877, 2022 | 3 | 2022 |
| The SWI/SNF subunits BRG1 affects alternative splicing by changing RNA binding factor interactions with RNA AG Zapater, SD Mackowiak, Y Guo, A Jordan-Pla, MR Friedländer, N Visa, ... bioRxiv, 858852, 2019 | 2 | 2019 |
Nikolaus RajewskyProfessor, Systems Biology, Max Delbruck Center for Molecular Medicine, BerlinVerified email at mdc-berlin.de
