| Fast and accurate protein structure search with Foldseek M van Kempen, SS Kim, C Tumescheit, M Mirdita, J Lee, CLM Gilchrist, ... Nature Biotechnology, 1-4, 2023 | 355 | 2023 |
| Foldseek: fast and accurate protein structure search M van Kempen, SS Kim, C Tumescheit, M Mirdita, CLM Gilchrist, J Söding, ... Biorxiv, 2022.02. 07.479398, 2022 | 166 | 2022 |
| AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms N Bordin, I Sillitoe, V Nallapareddy, C Rauer, SD Lam, VP Waman, N Sen, ... Communications biology 6 (1), 160, 2023 | 51 | 2023 |
| Novel machine learning approaches revolutionize protein knowledge N Bordin, C Dallago, M Heinzinger, S Kim, M Littmann, C Rauer, ... Trends in Biochemical Sciences, 2022 | 30 | 2022 |
| Accurately predicting disordered regions of proteins using Rosetta residuedisorder application SS Kim, JT Seffernick, S Lindert The journal of physical chemistry B 122 (14), 3920-3930, 2018 | 23 | 2018 |
| Improving inverse docking target identification with Z‐score selection SS Kim, ML Aprahamian, S Lindert Chemical biology & drug design 93 (6), 1105-1116, 2019 | 19 | 2019 |
| Measuring Intrinsic Disorder and Tracking Conformational Transitions Using Rosetta ResidueDisorder JT Seffernick, H Ren, SS Kim, S Lindert The journal of physical chemistry B 123 (33), 7103-7112, 2019 | 12 | 2019 |
| Prediction of intrinsic disorder using Rosetta ResidueDisorder and AlphaFold2 J He, SMBA Turzo, JT Seffernick, SS Kim, S Lindert The Journal of Physical Chemistry B 126 (42), 8439-8446, 2022 | 7 | 2022 |
| Identification of novel cyclin A2 binding site and nanomolar inhibitors of cyclin A2-CDK2 complex SS Kim, MJ Alves, P Gygli, J Otero, S Lindert Current computer-aided drug design 17 (1), 57-68, 2021 | 5 | 2021 |
