| Comprehensive analyses of 723 transcriptomes enhance genetic and biological interpretations for complex traits in cattle L Fang, W Cai, S Liu, O Canela-Xandri, Y Gao, J Jiang, K Rawlik, B Li, ... Genome research 30 (5), 790-801, 2020 | 107 | 2020 |
| Species composition and environmental adaptation of indigenous Chinese cattle Y Gao, M Gautier, X Ding, H Zhang, Y Wang, X Wang, MDO Faruque, J Li, ... Scientific reports 7 (1), 16196, 2017 | 87 | 2017 |
| CNV discovery for milk composition traits in dairy cattle using whole genome resequencing Y Gao, J Jiang, S Yang, Y Hou, GE Liu, S Zhang, Q Zhang, D Sun BMC genomics 18, 1-12, 2017 | 76 | 2017 |
| A multi-tissue atlas of regulatory variants in cattle S Liu, Y Gao, O Canela-Xandri, S Wang, Y Yu, W Cai, B Li, R Xiang, ... Nature genetics 54 (9), 1438-1447, 2022 | 71 | 2022 |
| Comparative whole genome DNA methylation profiling across cattle tissues reveals global and tissue-specific methylation patterns Y Zhou, S Liu, Y Hu, L Fang, Y Gao, H Xia, SG Schroeder, BD Rosen, ... BMC biology 18, 1-17, 2020 | 36 | 2020 |
| A compendium of genetic regulatory effects across pig tissues J Teng, Y Gao, H Yin, Z Bai, S Liu, H Zeng, PigGTEx Consortium, L Bai, ... Nature Genetics, 1-12, 2024 | 34 | 2024 |
| Whole-genome resequencing of Holstein bulls for indel discovery and identification of genes associated with milk composition traits in dairy cattle J Jiang, Y Gao, Y Hou, W Li, S Zhang, Q Zhang, D Sun PLoS One 11 (12), e0168946, 2016 | 31 | 2016 |
| Genome-wide association study of Mycobacterium avium subspecies Paratuberculosis infection in Chinese Holstein Y Gao, J Jiang, S Yang, J Cao, B Han, Y Wang, Y Zhang, Y Yu, S Zhang, ... BMC genomics 19, 1-10, 2018 | 29 | 2018 |
| A comprehensive catalogue of regulatory variants in the cattle transcriptome S Liu, Y Gao, O Canela-Xandri, S Wang, Y Yu, W Cai, B Li, R Xiang, ... BioRxiv, 2020.12. 01.406280, 2020 | 27 | 2020 |
| Determination of genetic associations between indels in 11 candidate genes and milk composition traits in Chinese Holstein population J Jiang, L Liu, Y Gao, L Shi, Y Li, W Liang, D Sun BMC genetics 20, 1-12, 2019 | 19 | 2019 |
| Single-cell transcriptomic analyses of dairy cattle ruminal epithelial cells during weaning Y Gao, L Fang, RLB VI, EE Connor, JB Cole, CP Van Tassell, L Ma, C Li, ... Genomics 113 (4), 2045-2055, 2021 | 17 | 2021 |
| Gene expression and RNA splicing explain large proportions of the heritability for complex traits in cattle R Xiang, L Fang, S Liu, IM Macleod, Z Liu, EJ Breen, Y Gao, GE Liu, ... Cell Genomics 3 (10), 2023 | 14 | 2023 |
| Comparative transcriptome in large-scale human and cattle populations Y Yao, S Liu, C Xia, Y Gao, Z Pan, O Canela-Xandri, A Khamseh, ... Genome biology 23 (1), 176, 2022 | 14 | 2022 |
| Genome-wide association studies for immunoglobulin concentrations in colostrum and serum in Chinese Holstein S Lin, C Ke, L Liu, Y Gao, L Xu, B Han, Y Zhao, S Zhang, D Sun BMC genomics 23, 1-13, 2022 | 10 | 2022 |
| Identification of Genetic Associations and Functional Polymorphisms of SAA1 Gene Affecting Milk Production Traits in Dairy Cattle S Yang, Y Gao, S Zhang, Q Zhang, D Sun Plos one 11 (9), e0162195, 2016 | 10 | 2016 |
| Single-cell transcriptomic and chromatin accessibility analyses of dairy cattle peripheral blood mononuclear cells and their responses to lipopolysaccharide Y Gao, J Li, G Cai, Y Wang, W Yang, Y Li, X Zhao, R Li, Y Gao, W Tuo, ... BMC genomics 23 (1), 338, 2022 | 9 | 2022 |
| Identification of alternative splicing events associated with paratuberculosis in dairy cattle using multi-tissue RNA sequencing data H Li, J Huang, J Zhang, Y Gao, B Han, D Sun Genes 13 (3), 497, 2022 | 8 | 2022 |
| Butyrate Induces Modifications of the CTCF-Binding Landscape in Cattle Cells C Boschiero, Y Gao, RL Baldwin, L Ma, C Li, GE Liu Biomolecules 12 (9), 1177, 2022 | 6 | 2022 |
| Heritability estimates for susceptibility to Mycobacterium avium ssp. paratuberculosis infection in Chinese Holstein cattle Y Gao, J Cao, S Zhang, Q Zhang, D Sun Journal of dairy science 101 (8), 7274-7279, 2018 | 6 | 2018 |
| FarmGTEx TWAS-server: an interactive web server for customized TWAS analysis in both human and farm animals Z Zhang, Z Chen, J Teng, S Liu, Q Lin, Y Gao, Z Bai, ... bioRxiv, 2023.02. 03.527092, 2023 | 5 | 2023 |
