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Aubrey Bailey
Aubrey Bailey
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Association between breast milk bacterial communities and establishment and development of the infant gut microbiome
PS Pannaraj, F Li, C Cerini, JM Bender, S Yang, A Rollie, H Adisetiyo, ...
JAMA pediatrics 171 (7), 647-654, 2017
10032017
Inflammation, antibiotics, and diet as environmental stressors of the gut microbiome in pediatric Crohn’s disease
JD Lewis, EZ Chen, RN Baldassano, AR Otley, AM Griffiths, D Lee, ...
Cell host & microbe 18 (4), 489-500, 2015
8242015
Comparison of placenta samples with contamination controls does not provide evidence for a distinct placenta microbiota
AP Lauder, AM Roche, S Sherrill-Mix, A Bailey, AL Laughlin, K Bittinger, ...
Microbiome 4, 1-11, 2016
5242016
Virus-helminth coinfection reveals a microbiota-independent mechanism of immunomodulation
LC Osborne, LA Monticelli, TJ Nice, TE Sutherland, MC Siracusa, ...
Science 345 (6196), 578-582, 2014
2752014
Viral metagenomics reveal blooms of anelloviruses in the respiratory tract of lung transplant recipients
JC Young, C Chehoud, K Bittinger, A Bailey, JM Diamond, E Cantu, ...
American Journal of Transplantation 15 (1), 200-209, 2015
2062015
A role for bacterial urease in gut dysbiosis and Crohn’s disease
J Ni, TCD Shen, EZ Chen, K Bittinger, A Bailey, M Roggiani, A Sirota-Madi, ...
Science translational medicine 9 (416), eaah6888, 2017
1972017
Human and rat gut microbiome composition is maintained following sleep restriction
SL Zhang, L Bai, N Goel, A Bailey, CJ Jang, FD Bushman, P Meerlo, ...
Proceedings of the National Academy of Sciences 114 (8), E1564-E1571, 2017
1332017
Peptidoglycan from the gut microbiota governs the lifespan of circulating phagocytes at homeostasis
CB Hergott, AM Roche, E Tamashiro, TB Clarke, AG Bailey, A Laughlin, ...
Blood, The Journal of the American Society of Hematology 127 (20), 2460-2471, 2016
1122016
INSPIIRED: a pipeline for quantitative analysis of sites of new DNA integration in cellular genomes
E Sherman, C Nobles, CC Berry, E Six, Y Wu, A Dryga, N Malani, F Male, ...
Molecular Therapy-Methods & Clinical Development 4, 39-49, 2017
972017
Population structure of human gut bacteria in a diverse cohort from rural Tanzania and Botswana
MEB Hansen, MA Rubel, AG Bailey, A Ranciaro, SR Thompson, ...
Genome Biology 20, 1-21, 2019
922019
A pilot characterization of the human chronobiome
C Skarke, NF Lahens, SD Rhoades, A Campbell, K Bittinger, A Bailey, ...
Scientific reports 7 (1), 17141, 2017
852017
Characterization of resistance gene analogues (RGAs) in apple (Malus× domestica Borkh.) and their evolutionary history of the Rosaceae family
M Perazzolli, G Malacarne, A Baldo, L Righetti, A Bailey, P Fontana, ...
PloS one 9 (2), e83844, 2014
762014
On-farm paddock-scale comparisons across southern Australia confirm that increasing the nutrition of Merino ewes improves their production and the lifetime performance of their …
R Behrendt, AJ Van Burgel, A Bailey, P Barber, M Curnow, DJ Gordon, ...
Animal Production Science 51 (9), 805-812, 2011
732011
INSPIIRED: quantification and visualization tools for analyzing integration site distributions
CC Berry, C Nobles, E Six, Y Wu, N Malani, E Sherman, A Dryga, ...
Molecular Therapy Methods & Clinical Development 4, 17-26, 2017
672017
Associations of the vaginal microbiota with HIV infection, bacterial vaginosis, and demographic factors
C Chehoud, DJ Stieh, AG Bailey, AL Laughlin, SA Allen, KL McCotter, ...
Aids 31 (7), 895-904, 2017
512017
Extracellular vesicles from Kaposi Sarcoma-associated herpesvirus lymphoma induce long-term endothelial cell reprogramming
RP McNamara, PE Chugh, A Bailey, LM Costantini, Z Ma, R Bigi, ...
PLoS pathogens 15 (2), e1007536, 2019
492019
High-density amplicon sequencing identifies community spread and ongoing evolution of SARS-CoV-2 in the Southern United States
RP McNamara, C Caro-Vegas, JT Landis, R Moorad, LJ Pluta, AB Eason, ...
Cell reports 33 (5), 2020
452020
Allometry and ecology of the bilaterian gut microbiome
S Sherrill-Mix, K McCormick, A Lauder, A Bailey, L Zimmerman, Y Li, ...
MBio 9 (2), 10.1128/mbio. 00319-18, 2018
382018
Quantitation of HIV DNA integration: effects of differential integration site distributions on Alu-PCR assays
T Brady, BJ Kelly, F Male, S Roth, A Bailey, N Malani, R Gijsbers, ...
Journal of virological methods 189 (1), 53-57, 2013
382013
Targeting mTOR with MLN0128 overcomes rapamycin and chemoresistant primary effusion lymphoma
C Caro-Vegas, A Bailey, R Bigi, B Damania, DP Dittmer
MBio 10 (1), 10.1128/mbio. 02871-18, 2019
282019
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