| Stochastic state transitions give rise to phenotypic equilibrium in populations of cancer cells PB Gupta, CM Fillmore, G Jiang, SD Shapira, K Tao, C Kuperwasser, ... Cell 146 (4), 633-644, 2011 | 1645 | 2011 |
| Meta-and orthogonal integration of influenza “OMICs” data defines a role for UBR4 in virus budding S Tripathi, MO Pohl, Y Zhou, A Rodriguez-Frandsen, G Wang, DA Stein, ... Cell host & microbe 18 (6), 723-735, 2015 | 901 | 2015 |
| A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection SD Shapira, I Gat-Viks, BOV Shum, A Dricot, MM de Grace, L Wu, ... Cell 139 (7), 1255-1267, 2009 | 736 | 2009 |
| The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses T Goldstein, SJ Anthony, A Gbakima, BH Bird, J Bangura, ... Nature microbiology 3 (10), 1084-1089, 2018 | 396* | 2018 |
| Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection V Ramlall, PM Thangaraj, C Meydan, J Foox, D Butler, J Kim, B May, ... Nature medicine 26 (10), 1609-1615, 2020 | 314 | 2020 |
| Helminth antigens modulate TLR-initiated dendritic cell activation CM Kane, L Cervi, J Sun, AS McKee, KS Masek, S Shapira, CA Hunter, ... The Journal of Immunology 173 (12), 7454-7461, 2004 | 304 | 2004 |
| Suppression of NF-κB Activation by Infection with Toxoplasma gondii S Shapira, K Speirs, A Gerstein, J Caamano, CA Hunter The Journal of infectious diseases 185 (Supplement_1), S66-S72, 2002 | 164 | 2002 |
| Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions D Butler, C Mozsary, C Meydan, J Foox, J Rosiene, A Shaiber, D Danko, ... Nature communications 12 (1), 1660, 2021 | 141 | 2021 |
| A structure-informed atlas of human-virus interactions G Lasso, SV Mayer, ER Winkelmann, T Chu, O Elliot, JA Patino-Galindo, ... Cell 178 (6), 1526-1541. e16, 2019 | 125 | 2019 |
| Differential requirement for NF-κB family members in control of helminth infection and intestinal inflammation D Artis, S Shapira, N Mason, KM Speirs, M Goldschmidt, J Caamaño, ... The Journal of Immunology 169 (8), 4481-4487, 2002 | 115 | 2002 |
| Initiation and termination of NF-κB signaling by the intracellular protozoan parasite Toxoplasma gondii S Shapira, OS Harb, J Margarit, M Matrajt, J Han, A Hoffmann, ... Journal of cell science 118 (15), 3501-3508, 2005 | 85 | 2005 |
| Opposing roles of NF-κB family members in the regulation of NK cell proliferation and production of IFN-γ CM Tato, N Mason, D Artis, S Shapira, JC Caamano, JH Bream, HC Liou, ... International immunology 18 (4), 505-513, 2006 | 80 | 2006 |
| Dendritic cell-intrinsic expression of NF-κB1 is required to promote optimal Th2 cell differentiation D Artis, CM Kane, J Fiore, C Zaph, S Shapira, K Joyce, A MacDonald, ... The Journal of Immunology 174 (11), 7154-7159, 2005 | 80 | 2005 |
| A computational interactome and functional annotation for the human proteome JI Garzon, L Deng, D Murray, S Shapira, D Petrey, B Honig Elife 5, e18715, 2016 | 64 | 2016 |
| Germ-cell-specific inflammasome component NLRP14 negatively regulates cytosolic nucleic acid sensing to promote fertilization T Abe, A Lee, R Sitharam, J Kesner, R Rabadan, SD Shapira Immunity 46 (4), 621-634, 2017 | 54 | 2017 |
| The NF-κB signaling pathway: immune evasion and immunoregulation during toxoplasmosis S Shapira, OS Harb, J Caamano, CA Hunter International journal for parasitology 34 (3), 393-400, 2004 | 49 | 2004 |
| Systems biology approaches to dissect mammalian innate immunity SD Shapira, N Hacohen Current opinion in immunology 23 (1), 71-77, 2011 | 36 | 2011 |
| A sweep of earth’s virome reveals host-guided viral protein structural mimicry and points to determinants of human disease G Lasso, B Honig, SD Shapira Cell Systems 12 (1), 82-91. e3, 2021 | 33 | 2021 |
| System-wide transcriptome damage and tissue identity loss in COVID-19 patients J Park, J Foox, T Hether, DC Danko, S Warren, Y Kim, J Reeves, DJ Butler, ... Cell Reports Medicine 3 (2), 2022 | 28 | 2022 |
| NF-κB1 contributes to T cell-mediated control of Toxoplasma gondii in the CNS TH Harris, EH Wilson, ED Tait, M Buckley, S Shapira, J Caamano, D Artis, ... Journal of neuroimmunology 222 (1-2), 19-28, 2010 | 28 | 2010 |
