Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy C Krishna, RG DiNatale, F Kuo, RM Srivastava, L Vuong, D Chowell, ... Cancer cell 39 (5), 662-677. e6, 2021 | 203 | 2021 |
Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development TJ Nowakowski*, N Rani*, M Golkaram*, HR Zhou* (*equal contribution), ... Nature Neuroscience, 1, 2018 | 145 | 2018 |
Multiple stiffening effects of nanoscale knobs on human red blood cells infected with Plasmodium falciparum malaria parasite Y Zhang, C Huang, S Kim, M Golkaram, MWA Dixon, L Tilley, J Li, ... Proceedings of the National Academy of Sciences 112 (19), 6068-6073, 2015 | 126 | 2015 |
Atomic-scale insight into the interactions between hydroxyl radicals and DNA in solution using the ReaxFF reactive force field CCW Verlackt, EC Neyts, T Jacob, D Fantauzzi, M Golkaram, YK Shin, ... New Journal of Physics 17 (10), 103005, 2015 | 54 | 2015 |
Macromolecular crowding regulates the gene expression profile by limiting diffusion M Golkaram, S Hellander, B Drawert, LR Petzold PLoS computational biology 12 (11), e1005122, 2016 | 38 | 2016 |
Spatiotemporal evolution of the clear cell renal cell carcinoma microenvironment links intra-tumoral heterogeneity to immune escape M Golkaram, F Kuo, S Gupta, MI Carlo, ML Salmans, R Vijayaraghavan, ... Genome Medicine 14 (1), 143, 2022 | 21 | 2022 |
HERVs establish a distinct molecular subtype in stage II/III colorectal cancer with poor outcome M Golkaram, ML Salmans, S Kaplan, R Vijayaraghavan, M Martins, ... NPJ genomic medicine 6 (1), 13, 2021 | 21 | 2021 |
The role of chromatin density in cell population heterogeneity during stem cell differentiation M Golkaram, J Jang, S Hellander, KS Kosik, LR Petzold Scientific reports 7 (1), 13307, 2017 | 18 | 2017 |
Revealing graphene oxide toxicity mechanisms: A reactive molecular dynamics study M Golkaram, ACT van Duin Materials discovery 1, 54-62, 2015 | 16 | 2015 |
Genetic and microenvironmental intra-tumor heterogeneity impacts colorectal cancer evolution and metastatic development D Sobral, M Martins, S Kaplan, M Golkaram, M Salmans, N Khan, ... Communications Biology 5 (1), 937, 2022 | 15 | 2022 |
Control over single-cell distribution of G1 lengths by WNT governs pluripotency J Jang, D Han, M Golkaram, M Audouard, G Liu, D Bridges, S Hellander, ... Plos Biology 17 (9), e3000453, 2019 | 14 | 2019 |
A targetable myeloid inflammatory state governs disease recurrence in clear-cell renal cell carcinoma PM Rappold, L Vuong, J Leibold, NH Chakiryan, M Curry, F Kuo, E Sabio, ... Cancer discovery 12 (10), 2308-2329, 2022 | 13 | 2022 |
Design and modeling of a novel translational and angular micro-electromechanical accelerometer M Amereh, MM Aghdam, M Golkaram Aerospace Science and Technology 50, 15-24, 2016 | 7 | 2016 |
Reactive molecular dynamics study of the pH-dependent dynamic structure of α-helix M Golkaram, YK Shin, ACT Van Duin The Journal of Physical Chemistry B 118 (47), 13498-13504, 2014 | 7 | 2014 |
Clinical-genomic determinants of immune checkpoint blockade response in head and neck squamous cell carcinoma C Valero*, M Golkaram*, JL Vos* (*equal contribution), B Xu, C Fitzgerald, ... The Journal of Clinical Investigation, 2023 | 5 | 2023 |
Immunometabolic coevolution defines unique microenvironmental niches in ccRCC C Tang, AX Xie, EM Liu, F Kuo, M Kim, RG DiNatale, M Golkaram, ... Cell Metabolism 35 (8), 1424-1440. e5, 2023 | 5 | 2023 |
Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization C Peixoto, MB Lopes, M Martins, S Casimiro, D Sobral, AR Grosso, ... BMC bioinformatics 24 (1), 17, 2023 | 5 | 2023 |
Free transverse vibration analysis of thin rectangular plates locally suspended on elastic beam M Golkaram, MM Aghdam Proceedings of the Institution of Mechanical Engineers, Part C: Journal of …, 2013 | 5 | 2013 |
Novel Genetic Subtypes of Urothelial Carcinoma With Differential Outcomes on Immune Checkpoint Blockade M Sarfaty*, M Golkaram* (*equal contribution), SA Funt, H Al-Ahmadie, ... Journal of Clinical Oncology, JCO. 22.02144, 2023 | 4 | 2023 |
The interplay between cancer type, panel size and tumor mutational burden threshold in patient selection for cancer immunotherapy M Golkaram, C Zhao, K Kruglyak, S Zhang, S Bilke PLOS Computational Biology 16 (11), e1008332, 2020 | 4 | 2020 |