Nitin Gupta
Nitin Gupta
Verified email at iitk.ac.in - Homepage
Title
Cited by
Cited by
Year
Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases
S Kim, N Gupta, PA Pevzner
Journal of proteome research 7 (8), 3354-3363, 2008
3882008
Does trypsin cut before proline?
J Rodriguez, N Gupta, RD Smith, PA Pevzner
Journal of proteome research 7 (01), 300-305, 2008
2352008
Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation
N Gupta, S Tanner, N Jaitly, JN Adkins, M Lipton, R Edwards, M Romine, ...
Genome research 17 (9), 1362-1377, 2007
2112007
False discovery rates of protein identifications: a strike against the two-peptide rule
N Gupta, PA Pevzner
Journal of proteome research 8 (9), 4173-4181, 2009
1732009
Target-decoy approach and false discovery rate: when things may go wrong
N Gupta, N Bandeira, U Keich, PA Pevzner
Journal of the American Society for Mass Spectrometry 22 (7), 1111-1120, 2011
1212011
Comparative proteogenomics: combining mass spectrometry and comparative genomics to analyze multiple genomes
N Gupta, J Benhamida, V Bhargava, D Goodman, E Kain, I Kerman, ...
Genome research 18 (7), 1133-1142, 2008
1212008
Spectral Dictionaries Integrating de novo Peptide Sequencing with Database Search of Tandem Mass Spectra
S Kim, N Gupta, N Bandeira, PA Pevzner
Molecular & Cellular Proteomics 8 (1), 53-69, 2009
1052009
QNet: a tool for querying protein interaction networks
B Dost, T Shlomi, N Gupta, E Ruppin, V Bafna, R Sharan
Journal of Computational Biology 15 (7), 913-925, 2008
1032008
The road not taken: creative solutions require avoidance of high-frequency responses
N Gupta, Y Jang, SC Mednick, DE Huber
Psychological science 23 (3), 288-294, 2012
862012
Functional analysis of a higher olfactory center, the lateral horn
N Gupta, M Stopfer
Journal of Neuroscience 32 (24), 8138-8148, 2012
822012
N-terminal protein processing: A comparative proteogenomic analysis
S Bonissone, N Gupta, M Romine, RA Bradshaw, PA Pevzner
Molecular & Cellular Proteomics 12 (1), 14-28, 2013
762013
QNet: a tool for querying protein interaction networks
B Dost, T Shlomi, N Gupta, E Ruppin, V Bafna, R Sharan
Annual International Conference on Research in Computational Molecular …, 2007
722007
Mining quantitative association rules in protein sequences
N Gupta, N Mangal, K Tiwari, P Mitra
Data Mining, 273-281, 2006
542006
Evolution and similarity evaluation of protein structures in contact map space
N Gupta, N Mangal, S Biswas
Proteins: Structure, Function, and Bioinformatics 59 (2), 196-204, 2005
492005
Urges for food and money spill over into motor system excitability before action is taken
N Gupta, AR Aron
European Journal of Neuroscience 33 (1), 183-188, 2011
442011
Analyzing protease specificity and detecting in vivo proteolytic events using tandem mass spectrometry
N Gupta, KK Hixson, DE Culley, RD Smith, PA Pevzner
Proteomics 10 (15), 2833-2844, 2010
322010
A temporal channel for information in sparse sensory coding
N Gupta, M Stopfer
Current Biology 24 (19), 2247-2256, 2014
302014
Coupled folding–binding versus docking: A lattice model study
N Gupta, A Irbäck
The Journal of chemical physics 120, 3983, 2004
302004
Mass spectrometry-based neuropeptidomics of secretory vesicles from human adrenal medullary pheochromocytoma reveals novel peptide products of prohormone processing
N Gupta, SJ Bark, WD Lu, L Taupenot, DT O’Connor, P Pevzner, V Hook
Journal of proteome research 9 (10), 5065-5075, 2010
272010
Matrix metalloproteinase-9 regulates neuronal circuit development and excitability
S Murase, CL Lantz, E Kim, N Gupta, R Higgins, M Stopfer, DA Hoffman, ...
Molecular neurobiology 53 (5), 3477-3493, 2016
252016
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Articles 1–20