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Ajasja Ljubetič
Ajasja Ljubetič
Research Assistant Professor, National Institute of Chemistry, MSCA alumni, Baker lab @ UW
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Design of coiled-coil protein-origami cages that self-assemble in vitro and in vivo
A Ljubetič, F Lapenta, H Gradišar, I Drobnak, J Aupič, Ž Strmšek, ...
Nature biotechnology 35 (11), 1094-1101, 2017
1812017
Modulation of coiled-coil dimer stability through surface residues while preserving pairing specificity
I Drobnak, H Gradišar, A Ljubetič, E Merljak, R Jerala
Journal of the American Chemical Society 139 (24), 8229-8236, 2017
762017
Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice
AC Hunt, JB Case, YJ Park, L Cao, K Wu, AC Walls, Z Liu, JE Bowen, ...
Science translational medicine 14 (646), eabn1252, 2022
692022
Advances in design of protein folds and assemblies
A Ljubetič, H Gradišar, R Jerala
Current Opinion in Chemical Biology 40, 65-71, 2017
312017
Distinctive recognition of flagellin by human and mouse Toll-like receptor 5
V Forstnerič, K Ivičak-Kocjan, A Ljubetič, R Jerala, M Benčina
PLoS One 11 (7), e0158894, 2016
282016
Fluorescence microspectroscopy as a tool to study mechanism of nanoparticles delivery into living cancer cells
Z Arsov, I Urbančič, M Garvas, D Biglino, A Ljubetič, T Koklič, J Štrancar
Biomedical optics express 2 (8), 2083-2095, 2011
282011
Bleaching-corrected fluorescence microspectroscopy with nanometer peak position resolution
I Urbančič, Z Arsov, A Ljubetič, D Biglino, J Štrancar
Optics Express 21 (21), 25291-25306, 2013
232013
SDSL-ESR-based protein structure characterization
J Štrancar, A Kavalenka, I Urbančič, A Ljubetič, MA Hemminga
European Biophysics Journal 39, 499-511, 2010
232010
Interpreting neural networks for biological sequences by learning stochastic masks
J Linder, A La Fleur, Z Chen, A Ljubetič, D Baker, S Kannan, G Seelig
Nature machine intelligence 4 (1), 41-54, 2022
192022
Designed folding pathway of modular coiled-coil-based proteins
J Aupič, Ž Strmšek, F Lapenta, D Pahovnik, T Pisanski, I Drobnak, ...
Nature communications 12 (1), 940, 2021
162021
Functional self-assembled nanovesicles based on β-cyclodextrin, liposomes and adamantyl guanidines as potential nonviral gene delivery vectors
A Štimac, M Tokić, A Ljubetič, T Vuletić, M Šekutor, J Požar, K Leko, ...
Organic & biomolecular chemistry 17 (18), 4640-4651, 2019
162019
Designing the structure and folding pathway of modular topological bionanostructures
A Ljubetič, I Drobnak, H Gradišar, R Jerala
Chemical Communications 52 (30), 5220-5229, 2016
162016
Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks
J Koehler Leman, S Lyskov, SM Lewis, J Adolf-Bryfogle, RF Alford, ...
Nature communications 12 (1), 6947, 2021
152021
Multivalent designed proteins protect against SARS-CoV-2 variants of concern
AC Hunt, JB Case, YJ Park, L Cao, K Wu, AC Walls, Z Liu, JE Bowen, ...
BioRxiv, 2021
152021
Recovering position-dependent diffusion from biased molecular dynamics simulations
A Ljubetič, I Urbančič, J Štrancar
The Journal of Chemical Physics 140 (8), 2014
152014
Coexistence of probe conformations in lipid phases—a polarized fluorescence microspectroscopy study
I Urbančič, A Ljubetič, Z Arsov, J Štrancar
Biophysical journal 105 (4), 919-927, 2013
132013
Polarized displacement by transcription activator-like effectors for regulatory circuits
T Lebar, A Verbič, A Ljubetič, R Jerala
Nature Chemical Biology 15 (1), 80-87, 2019
122019
Designed protein origami
I Drobnak, A Ljubetič, H Gradišar, T Pisanski, R Jerala
Protein-based Engineered Nanostructures, 7-27, 2016
122016
A multiplexed bacterial two-hybrid for rapid characterization of protein–protein interactions and iterative protein design
WC Boldridge, A Ljubetič, H Kim, N Lubock, D Szilágyi, J Lee, A Brodnik, ...
Nature Communications 14 (1), 4636, 2023
82023
Conchú ir
S Lyskov, FC Chou
SO., Der, BS, Drew, K., Kuroda, D., Xu, J., Weitzner, BD, Renfrew, PD …, 2013
42013
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Artículos 1–20