Gregory Smith
Title
Cited by
Cited by
Year
Drug response consistency in CCLE and CGP
M Bouhaddou, MS DiStefano, EA Riesel, E Carrasco, HY Holzapfel, ...
Nature 540 (7631), E9-E10, 2016
542016
Single-cell transcriptional profiles in human skeletal muscle
AB Rubenstein, GR Smith, U Raue, G Begue, K Minchev, F Ruf-Zamojski, ...
Scientific reports 10 (1), 1-15, 2020
462020
Surveying capsid assembly pathways through simulation-based data fitting
L Xie, GR Smith, X Feng, R Schwartz
Biophysical journal 103 (7), 1545-1554, 2012
372012
Innate immune response to influenza virus at single-cell resolution in human epithelial cells revealed paracrine induction of interferon lambda 1
I Ramos, G Smith, F Ruf-Zamojski, C Martínez-Romero, M Fribourg, ...
Journal of virology 93 (20), e00559-19, 2019
362019
Molecular transducers of physical activity consortium (MoTrPAC): Mapping the dynamic responses to exercise
JA Sanford, CD Nogiec, ME Lindholm, JN Adkins, D Amar, S Dasari, ...
Cell 181 (7), 1464-1474, 2020
352020
Applying Molecular Crowding Models to Simulations of Virus Capsid Assembly In Vitro
GR Smith, L Xie, B Lee, R Schwartz
Biophysical journal 106 (1), 310-320, 2014
352014
Single-cell stabilization method identifies gonadotrope transcriptional dynamics and pituitary cell type heterogeneity
F Ruf-Zamojski, Y Ge, V Nair, M Zamojski, H Pincas, C Toufaily, ...
Nucleic Acids Research, 2018
132018
Heterogeneous origins and functions of mouse skeletal muscle-resident macrophages
X Wang, AA Sathe, GR Smith, F Ruf-Zamojski, V Nair, KJ Lavine, C Xing, ...
Proceedings of the National Academy of Sciences 117 (34), 20729-20740, 2020
92020
A mechanistic beta-binomial probability model for mRNA sequencing data
GR Smith, MR Birtwistle
PLoS One 11 (6), e0157828, 2016
92016
Modeling effects of RNA on capsid assembly pathways via coarse-grained stochastic simulation
GR Smith, L Xie, R Schwartz
PloS one 11 (5), e0156547, 2016
82016
mRNA-1273 efficacy in a severe COVID-19 model: attenuated activation of pulmonary immune cells after challenge
M Meyer, Y Wang, D Edwards, GR Smith, AB Rubenstein, P Ramanathan, ...
bioRxiv, 2021
52021
Single nucleus multi-omics regulatory atlas of the murine pituitary
F Ruf-Zamojski, Z Zhang, M Zamojski, GR Smith, N Mendelev, H Liu, ...
bioRxiv, 2020
22020
Network reconstruction from perturbation time course data
GR Smith, D Sarmah, M Bouhaddou, AD Stern, J Erskine, M Birtwistle
bioRxiv, 341008, 2020
22020
Applying derivative-free optimization to fit kinetic parameters of viral capsid self-assembly models from multi-source bulk in vitro data
L Xie, G Smith, R Schwartz
Biophysical Journal 108 (2), 470a-471a, 2015
22015
Single nucleus multi-omics regulatory landscape of the murine pituitary
F Ruf-Zamojski, Z Zhang, M Zamojski, GR Smith, N Mendelev, H Liu, ...
Nature communications 12 (1), 1-20, 2021
12021
Derivative-free optimization of rate parameters of capsid assembly models from bulk in vitro data
L Xie, GR Smith, R Schwartz
IEEE/ACM transactions on computational biology and bioinformatics 14 (4 …, 2016
12016
Evaluating the influence of environment on virus capsid assembly pathways through stochastic simulation
GR Smith, L Xie, B Lee, R Schwartz
Biophysical Journal 106 (2), 61a, 2014
12014
Learning Physical Parameters of Capsid Assembly Systems from Indirect Measures of Assembly Progress
MS Kumar, G Smith, L Xie, RP Khandpur, R Schwartz
Biophysical Journal 100 (3), 402a-403a, 2011
12011
Differential analysis of chromatin accessibility and gene expression profiles identifies cis-regulatory elements in rat adipose and muscle
VD Nair, M Vasoya, V Nair, GR Smith, H Pincas, Y Ge, CM Douglas, ...
Genomics, 2021
2021
Attenuated activation of pulmonary immune cells in mRNA-1273 vaccinated hamsters after SARS-CoV-2 infection
M Meyer, Y Wang, D Edwards, GR Smith, AB Rubenstein, P Ramanathan, ...
The Journal of Clinical Investigation, 2021
2021
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Articles 1–20