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Zizhen Yao
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Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
B Tasic, V Menon, TN Nguyen, TK Kim, T Jarsky, Z Yao, B Levi, LT Gray, ...
Nature neuroscience 19 (2), 335-346, 2016
16132016
Shared and distinct transcriptomic cell types across neocortical areas
B Tasic, Z Yao, LT Graybuck, KA Smith, TN Nguyen, D Bertagnolli, ...
Nature 563 (7729), 72-78, 2018
14162018
Conserved cell types with divergent features in human versus mouse cortex
RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ...
Nature 573 (7772), 61-68, 2019
13652019
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science 360 (6385), 176-182, 2018
10932018
A suite of transgenic driver and reporter mouse lines with enhanced brain-cell-type targeting and functionality
TL Daigle, L Madisen, TA Hage, MT Valley, U Knoblich, RS Larsen, ...
Cell 174 (2), 465-480. e22, 2018
6122018
Canonical genetic signatures of the adult human brain
M Hawrylycz, JA Miller, V Menon, D Feng, T Dolbeare, ...
Nature neuroscience 18 (12), 1832-1844, 2015
5622015
A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation
Z Yao, CTJ Van Velthoven, TN Nguyen, J Goldy, AE Sedeno-Cortes, ...
Cell 184 (12), 3222-3241. e26, 2021
5442021
Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming
Y Cao, Z Yao, D Sarkar, M Lawrence, GJ Sanchez, MH Parker, ...
Developmental cell 18 (4), 662-674, 2010
5222010
DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy
LN Geng, Z Yao, L Snider, AP Fong, JN Cech, JM Young, ...
Developmental cell 22 (1), 38-51, 2012
4642012
Single-nucleus and single-cell transcriptomes compared in matched cortical cell types
TE Bakken, RD Hodge, JA Miller, Z Yao, TN Nguyen, B Aevermann, ...
PloS one 13 (12), e0209648, 2018
4482018
CMfinder—a covariance model based RNA motif finding algorithm
Z Yao, Z Weinberg, WL Ruzzo
Bioinformatics 22 (4), 445-452, 2006
4252006
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
Z Weinberg, JE Barrick, Z Yao, A Roth, JN Kim, J Gore, JX Wang, ER Lee, ...
Nucleic acids research 35 (14), 4809-4819, 2007
3972007
Comparative cellular analysis of motor cortex in human, marmoset and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
Nature 598 (7879), 111-119, 2021
3812021
Distinct descending motor cortex pathways and their roles in movement
MN Economo, S Viswanathan, B Tasic, E Bas, J Winnubst, V Menon, ...
Nature 563 (7729), 79-84, 2018
3612018
Integrated morphoelectric and transcriptomic classification of cortical GABAergic cells
NW Gouwens, SA Sorensen, F Baftizadeh, A Budzillo, BR Lee, T Jarsky, ...
Cell 183 (4), 935-953. e19, 2020
3172020
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
2622021
Phenotypic variation of transcriptomic cell types in mouse motor cortex
F Scala, D Kobak, M Bernabucci, Y Bernaerts, CR Cadwell, JR Castro, ...
Nature 598 (7879), 144-150, 2021
2462021
Fixed single-cell transcriptomic characterization of human radial glial diversity
ER Thomsen, JK Mich, Z Yao, RD Hodge, AM Doyle, S Jang, SI Shehata, ...
Nature methods 13 (1), 87-93, 2016
2372016
Spatially resolved cell atlas of the mouse primary motor cortex by MERFISH
M Zhang, SW Eichhorn, B Zingg, Z Yao, K Cotter, H Zeng, H Dong, ...
Nature 598 (7879), 137-143, 2021
2142021
DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle
Z Yao, L Snider, J Balog, RJLF Lemmers, SM Van Der Maarel, R Tawil, ...
Human molecular genetics 23 (20), 5342-5352, 2014
2122014
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