Wouter Boomsma

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Thomas HamelryckDpt. of computer science / Dpt. of biology, University of CopenhagenDirección de correo verificada de bio.ku.dk
Kresten Lindorff-LarsenLinderstrøm-Lang Centre for Protein Science, Department of Biology, University of CopenhagenDirección de correo verificada de bio.ku.dk
Jes FrellsenAssociate Professor, Technical University of Denmark (DTU)Dirección de correo verificada de dtu.dk
Jesper Ferkinghoff-BorgAssociate Professor, Research Director, Novo Nordisk A/SDirección de correo verificada de novonordisk.com
Sandro BottaroPeptoneDirección de correo verificada de peptone.io
Pengfei TianProtein Design ScientistDirección de correo verificada de nih.gov
Birthe B. KragelundProfessor of protein biophysics, University of CopenhagenDirección de correo verificada de bio.ku.dk
Simon OlssonChalmers University of TechnologyDirección de correo verificada de chalmers.se
Kanti MardiaSENIOR RESARCH PROFESSOR ,UNIVERSITY OF LEEDS AND UNIVERSITY OF OXFORDDirección de correo verificada de leeds.ac.uk
Tim HarderResearch Scientist at Philips ResearchDirección de correo verificada de philips.com
Christian AndreettaUniv. of Copenhagen, Denmark, and Uni Computing, Uni Research, NorwayDirección de correo verificada de uni.no
Kristoffer Enøe JohanssonDepartment of Biology, University of CopenhagenDirección de correo verificada de bio.ku.dk
Yong WangZhejiang UniversityDirección de correo verificada de zju.edu.cn
Eske WillerslevCentre for GeoGenetics, University of CopenhagenDirección de correo verificada de snm.ku.dk
Kasper MunchBioinformatics Research Centre, Aarhus UniversityDirección de correo verificada de daimi.au.dk
Rasmus NielsenUC Berkeley, University of CopenhagenDirección de correo verificada de sund.ku.dk
Charles C TaylorUniversity of LeedsDirección de correo verificada de maths.leeds.ac.uk
Taco CohenQualcomm AI ResearchDirección de correo verificada de qti.qualcomm.com
Max WellingDistinguished Scientist at MSR AI4Science & Professor Machine Learning, University of AmsterdamDirección de correo verificada de uva.nl
Maurice WeilerUniversity of AmsterdamDirección de correo verificada de uva.nl

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Wouter Boomsma

Professor, Department of Computer Science, University of Copenhagen

Dirección de correo verificada de di.ku.dk

Machine learning Structural Bioinformatics Biomolecular simulations


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
Ancient biomolecules from deep ice cores reveal a forested southern Greenland E Willerslev, E Cappellini, W Boomsma, R Nielsen, MB Hebsgaard, ... Science 317 (5834), 111-114, 2007	531	2007
3d steerable cnns: Learning rotationally equivariant features in volumetric data M Weiler, M Geiger, M Welling, W Boomsma, TS Cohen Advances in Neural Information Processing Systems 31, 2018	494	2018
Statistical assignment of DNA sequences using Bayesian phylogenetics K Munch, W Boomsma, JP Huelsenbeck, E Willerslev, R Nielsen Systematic biology 57 (5), 750-757, 2008	218	2008
A generative, probabilistic model of local protein structure W Boomsma, KV Mardia, CC Taylor, J Ferkinghoff-Borg, A Krogh, ... Proceedings of the National Academy of Sciences 105 (26), 8932-8937, 2008	205	2008
Combining experiments and simulations using the maximum entropy principle W Boomsma, J Ferkinghoff-Borg, K Lindorff-Larsen PLoS computational biology 10 (2), e1003406, 2014	191	2014
Comparing molecular dynamics force fields in the essential subspace F Martín-García, E Papaleo, P Gomez-Puertas, W Boomsma, ... PLoS One 10 (3), e0121114, 2015	106	2015
Structure of a functional amyloid protein subunit computed using sequence variation P Tian, W Boomsma, Y Wang, DE Otzen, MH Jensen, K Lindorff-Larsen Journal of the American Chemical Society 137 (1), 22-25, 2015	106	2015
Potentials of mean force for protein structure prediction vindicated, formalized and generalized T Hamelryck, M Borg, M Paluszewski, J Paulsen, J Frellsen, C Andreetta, ... PloS one 5 (11), e13714, 2010	100	2010
Spherical convolutions and their application in molecular modelling W Boomsma, J Frellsen Advances in neural information processing systems 30, 2017	97	2017
Learning meaningful representations of protein sequences NS Detlefsen, S Hauberg, W Boomsma Nature communications 13 (1), 1914, 2022	93	2022
The PCNA interaction motifs revisited: thinking outside the PIP-box A Prestel, N Wichmann, JM Martins, R Marabini, N Kassem, SS Broendum, ... Cellular and Molecular Life Sciences 76, 4923-4943, 2019	86	2019
Beyond rotamers: a generative, probabilistic model of side chains in proteins T Harder, W Boomsma, M Paluszewski, J Frellsen, KE Johansson, ... BMC bioinformatics 11, 1-13, 2010	84	2010
Fast phylogenetic DNA barcoding K Munch, W Boomsma, E Willerslev, R Nielsen Philosophical Transactions of the Royal Society B: Biological Sciences 363 …, 2008	82	2008
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients E Jimenez-Solem, TS Petersen, C Hansen, C Hansen, C Lioma, C Igel, ... Scientific reports 11 (1), 3246, 2021	81	2021
ENCORE: software for quantitative ensemble comparison M Tiberti, E Papaleo, T Bengtsen, W Boomsma, K Lindorff-Larsen PLoS computational biology 11 (10), e1004415, 2015	77	2015
Inference of structure ensembles of flexible biomolecules from sparse, averaged data S Olsson, J Frellsen, W Boomsma, KV Mardia, T Hamelryck PloS one 8 (11), e79439, 2013	61	2013
Bayesian inference of protein ensembles from SAXS data LD Antonov, S Olsson, W Boomsma, T Hamelryck Physical Chemistry Chemical Physics 18 (8), 5832-5838, 2016	58	2016
Barnaba: software for analysis of nucleic acid structures and trajectories S Bottaro, G Bussi, G Pinamonti, S Reißer, W Boomsma, K Lindorff-Larsen Rna 25 (2), 219-231, 2019	56	2019
Rapid expansion of the protein disulfide isomerase gene family facilitates the folding of venom peptides H Safavi-Hemami, Q Li, RL Jackson, AS Song, W Boomsma, ... Proceedings of the National Academy of Sciences 113 (12), 3227-3232, 2016	47	2016
PHAISTOS: a framework for Markov chain Monte Carlo simulation and inference of protein structure W Boomsma, J Frellsen, T Harder, S Bottaro, KE Johansson, P Tian, ... Journal of computational chemistry 34 (19), 1697-1705, 2013	47	2013

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