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Stephen D Larson
Stephen D Larson
OpenWorm Foundation
Dirección de correo verificada de openworm.org - Página principal
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Sensory maps in the olfactory cortex defined by long-range viral tracing of single neurons
S Ghosh, SD Larson, H Hefzi, Z Marnoy, T Cutforth, K Dokka, KK Baldwin
Nature 472 (7342), 217-220, 2011
2952011
The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience
WJ Bug, GA Ascoli, JS Grethe, A Gupta, C Fennema-Notestine, AR Laird, ...
Neuroinformatics 6, 175-194, 2008
1782008
OpenWorm: an open-science approach to modeling Caenorhabditis elegans
B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ...
Frontiers in computational neuroscience 8, 137, 2014
1722014
OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans
GP Sarma, CW Lee, T Portegys, V Ghayoomie, T Jacobs, B Alicea, ...
Philosophical Transactions of the Royal Society B 373 (1758), 20170382, 2018
1302018
Digital atlasing and standardization in the mouse brain
M Hawrylycz, RA Baldock, A Burger, T Hashikawa, GA Johnson, ...
PLoS computational biology 7 (2), e1001065, 2011
1162011
The cell centered database project: an update on building community resources for managing and sharing 3D imaging data
ME Martone, J Tran, WW Wong, J Sargis, L Fong, S Larson, SP Lamont, ...
Journal of structural biology 161 (3), 220-231, 2008
1072008
NeuroLex. org: an online framework for neuroscience knowledge
SD Larson, ME Martone
Frontiers in neuroinformatics 7, 18, 2013
882013
Open source brain: a collaborative resource for visualizing, analyzing, simulating, and developing standardized models of neurons and circuits
P Gleeson, M Cantarelli, B Marin, A Quintana, M Earnshaw, S Sadeh, ...
Neuron 103 (3), 395-411. e5, 2019
802019
Ontologies for neuroscience: what are they and what are they good for?
SD Larson, ME Martone
Frontiers in neuroscience 3, 390, 2009
692009
Development and use of ontologies inside the neuroscience information framework: a practical approach
FT Imam, S Larson, JS Grethe, A Bandrowski, ME Martone
Frontiers in genetics 3, 24416, 2012
632012
c302: a multiscale framework for modelling the nervous system of Caenorhabditis elegans
P Gleeson, D Lung, R Grosu, R Hasani, SD Larson
Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018
532018
Towards a virtual C. elegans: A framework for simulation and visualization of the neuromuscular system in a 3D physical environment
A Palyanov, S Khayrulin, SD Larson, A Dibert
In silico biology 11 (3-4), 137-147, 2012
492012
Application of smoothed particle hydrodynamics to modeling mechanisms of biological tissue
A Palyanov, S Khayrulin, SD Larson
Advances in Engineering Software 98, 1-11, 2016
462016
Three-dimensional simulation of the Caenorhabditis elegans body and muscle cells in liquid and gel environments for behavioural analysis
A Palyanov, S Khayrulin, SD Larson
Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018
362018
A formal ontology of subcellular neuroanatomy
SD Larson, LL Fong, A Gupta, C Condit, WJ Bug, ME Martone
Frontiers in neuroinformatics 1, 98, 2007
352007
Unit testing, model validation, and biological simulation
GP Sarma, TW Jacobs, MD Watts, SV Ghayoomie, SD Larson, RC Gerkin
F1000Research 5, 2016
302016
A survey of the neuroscience resource landscape: perspectives from the neuroscience information framework
J Cachat, A Bandrowski, JS Grethe, A Gupta, V Astakhov, F Imam, ...
International review of neurobiology 103, 39-68, 2012
232012
Microengineered 3D collagen gels with independently tunable fiber anisotropy and directionality
A Ahmed, IM Joshi, S Larson, M Mansouri, S Gholizadeh, Z Allahyari, ...
Advanced materials technologies 6 (4), 2001186, 2021
162021
Arabidopsis bioinformatics resources: The current state, challenges, and priorities for the future
International Arabidopsis Informatics Consortium, C Doherty, J Friesner, ...
Plant Direct 3 (1), e00109, 2019
162019
A Trypanosoma brucei ORFeome-based gain-of-function library identifies genes that promote survival during melarsoprol treatment
MK Carter, S Gomez, S Gritz, S Larson, E Silva-Herzog, HS Kim, D Schulz, ...
Msphere 5 (5), 10.1128/msphere. 00769-20, 2020
132020
El sistema no puede realizar la operación en estos momentos. Inténtalo de nuevo más tarde.
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