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Vinod Kumar
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HumCFS: a database of fragile sites in human chromosomes
R Kumar, G Nagpal, V Kumar, SS Usmani, P Agrawal, GPS Raghava
BMC genomics 19, 1-8, 2019
812019
In silico tools and databases for designing peptide-based vaccine and drugs
SS Usmani, R Kumar, S Bhalla, V Kumar, GPS Raghava
Advances in protein chemistry and structural biology 112, 221-263, 2018
572018
Prediction of cell-penetrating potential of modified peptides containing natural and chemically modified residues
V Kumar, P Agrawal, R Kumar, S Bhalla, SS Usmani, GC Varshney, ...
Frontiers in microbiology 9, 348598, 2018
522018
AntiTbPdb: a knowledgebase of anti-tubercular peptides
SS Usmani, R Kumar, V Kumar, S Singh, GPS Raghava
Database 2018, bay025, 2018
502018
Computing wide range of protein/peptide features from their sequence and structure
A Pande, S Patiyal, A Lathwal, C Arora, D Kaur, A Dhall, G Mishra, H Kaur, ...
BioRxiv, 599126, 2019
492019
B3pred: A random-forest-based method for predicting and designing blood–brain barrier penetrating peptides
V Kumar, S Patiyal, A Dhall, N Sharma, GPS Raghava
Pharmaceutics 13 (8), 1237, 2021
322021
Docking‐based approach for identification of mutations that disrupt binding between Bcl‐2 and Bax proteins: Inducing apoptosis in cancer cells
PK Raghav, R Kumar, V Kumar, GPS Raghava
Molecular genetics & genomic medicine 7 (11), e910, 2019
292019
A method for predicting hemolytic potency of chemically modified peptides from its structure
V Kumar, R Kumar, P Agrawal, S Patiyal, GPS Raghava
Frontiers in pharmacology 11, 495822, 2020
262020
NAGbinder: An approach for identifying N‐acetylglucosamine interacting residues of a protein from its primary sequence
S Patiyal, P Agrawal, V Kumar, A Dhall, R Kumar, G Mishra, ...
Protein Science 29 (1), 201-210, 2020
262020
Pfeature: A tool for computing wide range of protein features and building prediction models
A Pande, S Patiyal, A Lathwal, C Arora, D Kaur, A Dhall, G Mishra, H Kaur, ...
Journal of Computational Biology 30 (2), 204-222, 2023
202023
B3Pdb: an archive of blood–brain barrier-penetrating peptides
V Kumar, S Patiyal, R Kumar, S Sahai, D Kaur, A Lathwal, GPS Raghava
Brain Structure and Function 226, 2489-2495, 2021
182021
CancerEnD: a database of cancer associated enhancers
R Kumar, A Lathwal, V Kumar, S Patiyal, PK Raghav, GPS Raghava
Genomics 112 (5), 3696-3702, 2020
172020
DenvInD: dengue virus inhibitors database for clinical and molecular research
VD Dwivedi, A Arya, P Yadav, R Kumar, V Kumar, GPS Raghava
Briefings in Bioinformatics 22 (3), bbaa098, 2021
162021
In silico analysis of gene expression change associated with copy number of enhancers in pancreatic adenocarcinoma
R Kumar, S Patiyal, V Kumar, G Nagpal, GPS Raghava
International journal of molecular sciences 20 (14), 3582, 2019
132019
ccPDB 2.0: an updated version of datasets created and compiled from Protein Data Bank
P Agrawal, S Patiyal, R Kumar, V Kumar, H Singh, PK Raghav, ...
Database 2019, bay142, 2019
132019
GPSRdocker: a Docker-based resource for genomics, proteomics and systems biology
P Agrawal, R Kumar, SS Usmani, A Dhall, S Patiyal, N Sharma, H Kaur, ...
BioRxiv, 827766, 2019
92019
Impact of chemoinformatics approaches and tools on current chemical research
R Kumar, A Lathwal, G Nagpal, V Kumar, PK Raghav
Chemoinformatics and bioinformatics in the pharmaceutical Sciences, 1-26, 2021
42021
In silico design of chemically modified cell-penetrating peptides
V Kumar, GPS Raghava
Cell Penetrating Peptides: Methods and Protocols, 63-71, 2022
32022
A repository of web-based bioinformatics resources developed in India
A Agarwal, P Agrawal, A Sharma, V Kumar, C Mugdal, A Dhall, ...
bioRxiv, 2020.01. 21.855627, 2020
12020
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Articles 1–19