Asa Ben-Hur

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Hava SiegelmannProfessor of Computer Science, and Brain Sciences, UMass AmherstVerified email at cs.umass.edu
Anireddy S.N. ReddyProfessor of Biology, Colorado State University, Fort Collins, USAVerified email at colostate.edu
Jason WestonFacebookVerified email at fb.com
William Stafford NobleProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
vapnikProfessor of Columbia, Fellow of NEC Labs America, Verified email at nec-labs.com
Mark RogersInvitaeVerified email at bristol.ac.uk
Douglas BrutlagProfessor Emeritus of Biochemistry and Medicine, Stanford UniversityVerified email at stanford.edu
Fayyaz ul Amir Afsar MinhasUniversity of WarwickVerified email at alumni.colostate.edu
Shmuel FishmanTechnionVerified email at physics.technion.ac.il
Artem SokolovHarvard Medical SchoolVerified email at hms.harvard.edu
Karin VerspoorExecutive Dean, School of Computing Technologies, RMIT UniversityVerified email at rmit.edu.au
Cheng Soon OngData61, CSIRO, CanberraVerified email at anu.edu.au
Gunnar RätschProfessor, ETH ZürichVerified email at inf.ethz.ch
Soeren SonnenburgMachine Learning ResearcherVerified email at tomtom.com
Bernhard SchölkopfDirector, Max Planck Institute for Intelligent Systems; Professor at ETH Zürich, and DistinguishedVerified email at tuebingen.mpg.de
Indika KahandaUniversity of North FloridaVerified email at unf.edu
Roded SharanTel Aviv UniversityVerified email at post.tau.ac.il
Olivier ChapelleGoogleVerified email at chapelle.cc
Alex FoutDepartment of Statistics, Colorado State UniversityVerified email at colostate.edu
Robert ShaferProfessor of Medicine, Stanford UniversityVerified email at stanford.edu

Asa Ben-Hur

Computer Science, Colorado State University

Verified email at cs.colostate.edu - Homepage

Bioinformatics Machine learning


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Support vector clustering A Ben-Hur, D Horn, HT Siegelmann, V Vapnik Journal of machine learning research 2 (Dec), 125-137, 2001	1799	2001
A user’s guide to support vector machines A Ben-Hur, J Weston Data mining techniques for the life sciences, 223-239, 2010	992	2010
A large-scale evaluation of computational protein function prediction P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ... Nature methods 10 (3), 221-227, 2013	803	2013
A stability based method for discovering structure in clustered data A Ben-Hur, A Elisseeff, I Guyon Pacific Symposium on Biocomputing 2002, 6-17, 2001	757	2001
Kernel methods for predicting protein–protein interactions A Ben-Hur, WS Noble Bioinformatics 21 (suppl_1), i38-i46, 2005	729	2005
Result analysis of the nips 2003 feature selection challenge I Guyon, S Gunn, A Ben-Hur, G Dror Advances in neural information processing systems 17, 2004	638	2004
Support vector machines and kernels for computational biology A Ben-Hur, CS Ong, S Sonnenburg, B Schölkopf, G Rätsch PLoS computational biology 4 (10), e1000173, 2008	633	2008
Large-scale identification of yeast integral membrane protein interactions JP Miller, RS Lo, A Ben-Hur, C Desmarais, I Stagljar, WS Noble, S Fields Proceedings of the National Academy of Sciences 102 (34), 12123-12128, 2005	324	2005
Protein interface prediction using graph convolutional networks AM Fout, J Byrd, B Shariat, A Ben-Hur Advances in Neural Information Processing Systems (NIPS), 2017	320	2017
A survey of the sorghum transcriptome using single-molecule long reads SE Abdel-Ghany, M Hamilton, JL Jacobi, P Ngam, N Devitt, F Schilkey, ... Nature communications 7 (1), 1-11, 2016	295	2016
Genotypic predictors of human immunodeficiency virus type 1 drug resistance SY Rhee, J Taylor, G Wadhera, A Ben-Hur, DL Brutlag, RW Shafer Proceedings of the National Academy of Sciences 103 (46), 17355-17360, 2006	291	2006
An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 1-19, 2016	286	2016
Detecting stable clusters using principal component analysis A Ben-Hur, I Guyon Functional genomics, 159-182, 2003	245	2003
Choosing negative examples for the prediction of protein-protein interactions A Ben-Hur, WS Noble BMC bioinformatics 7 (1), 1-6, 2006	244	2006
Remote homology detection: a motif based approach A Ben-Hur, D Brutlag Bioinformatics 19 (suppl_1), i26-i33, 2003	236	2003
RAMClust: a novel feature clustering method enables spectral-matching-based annotation for metabolomics data CD Broeckling, FA Afsar, S Neumann, A Ben-Hur, JE Prenni Analytical chemistry 86 (14), 6812-6817, 2014	187	2014
Universality in sandpile models A Ben-Hur, O Biham Physical Review E 53 (2), R1317, 1996	172	1996
A support vector clustering method A Ben-Hur, D Horn, HT Siegelmann, V Vapnik Proceedings 15th International Conference on Pattern Recognition. ICPR-2000 …, 2000	154	2000
CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments R Sharan, I Ovcharenko, A Ben-Hur, RM Karp Bioinformatics 19 (suppl_1), i283-i291, 2003	142	2003
SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data MF Rogers, J Thomas, ASN Reddy, A Ben-Hur Genome biology 13 (1), 1-17, 2012	136	2012

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