| More is better: recent progress in multi-omics data integration methods S Huang, K Chaudhary, LX Garmire Frontiers in genetics 8, 268903, 2017 | 643 | 2017 |
| Power analysis and sample size estimation for RNA-Seq differential expression T Ching, S Huang, LX Garmire Rna 20 (11), 1684-1696, 2014 | 263 | 2014 |
| Novel personalized pathway-based metabolomics models reveal key metabolic pathways for breast cancer diagnosis S Huang, N Chong, NE Lewis, W Jia, G Xie, LX Garmire Genome medicine 8, 1-14, 2016 | 136 | 2016 |
| DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data OB Poirion, Z Jing, K Chaudhary, S Huang, LX Garmire Genome medicine 13, 1-15, 2021 | 113 | 2021 |
| Time Series miRNA-mRNA integrated analysis reveals critical miRNAs and targets in macrophage polarization L Lu, S McCurdy, S Huang, X Zhu, K Peplowska, M Tiirikainen, ... Scientific reports 6 (1), 37446, 2016 | 88 | 2016 |
| A novel model to combine clinical and pathway-based transcriptomic information for the prognosis prediction of breast cancer S Huang, C Yee, T Ching, H Yu, LX Garmire PLoS computational biology 10 (9), e1003851, 2014 | 81 | 2014 |
| Using single-cell multiple omics approaches to resolve tumor heterogeneity MA Ortega, O Poirion, X Zhu, S Huang, TK Wolfgruber, R Sebra, ... Clinical and translational medicine 6, 1-16, 2017 | 73 | 2017 |
| Using epigenomics data to predict gene expression in lung cancer J Li, T Ching, S Huang, LX Garmire BMC bioinformatics 16, 1-12, 2015 | 68 | 2015 |
| Multimodal meta-analysis of 1,494 hepatocellular carcinoma samples reveals significant impact of consensus driver genes on phenotypes K Chaudhary, OB Poirion, L Lu, S Huang, T Ching, LX Garmire Clinical Cancer Research 25 (2), 463-472, 2019 | 47 | 2019 |
| Pan-cancer analyses reveal long intergenic non-coding RNAs relevant to tumor diagnosis, subtyping and prognosis T Ching, K Peplowska, S Huang, X Zhu, Y Shen, J Molnar, H Yu, ... EBioMedicine 7, 62-72, 2016 | 35 | 2016 |
| Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data FM AlAkwaa, B Yunits, S Huang, H Alhajaji, LX Garmire Gigascience 7 (12), giy136, 2018 | 32 | 2018 |
| Meta-dimensional data integration identifies critical pathways for susceptibility, tumorigenesis and progression of endometrial cancer R Wei, I De Vivo, S Huang, X Zhu, H Risch, JH Moore, H Yu, LX Garmire Oncotarget 7 (34), 55249, 2016 | 19 | 2016 |
| More is better: recent progress in multi-omics data integration methods. Front Genet. 2017; 8: 84 S Huang, K Chaudhary, LX Garmire Epub 2017/07/04. https://doi. org/10.3389/fgene. 2017.00084 PMID: 28670325, 2017 | 15 | 2017 |
| Multi-omics-based pan-cancer prognosis prediction using an ensemble of deep-learning and machine-learning models OB Poirion, K Chaudhary, S Huang, LX Garmire medRxiv, 19010082, 2020 | 9 | 2020 |
| A nomogram derived by combination of demographic and biomarker data improves the noninvasive evaluation of patients at risk for bladder cancer S Huang, L Kou, H Furuya, C Yu, S Goodison, MW Kattan, L Garmire, ... Cancer Epidemiology, Biomarkers & Prevention 25 (9), 1361-1366, 2016 | 9 | 2016 |
| Integration of spatial and single-cell data across modalities with weakly linked features S Chen, B Zhu, S Huang, JW Hickey, KZ Lin, M Snyder, WJ Greenleaf, ... Nature Biotechnology, 1-11, 2023 | 7 | 2023 |
| Single cell and spatial alternative splicing analysis with long read sequencing Y Fu, H Kim, JI Adams, SM Grimes, S Huang, BT Lau, A Sathe, P Hess, ... Research Square, 2023 | 2 | 2023 |
| Mettl3-catalyzed m6A regulates histone modifier and modification expression in self-renewing somatic tissue AM Maldonado López, EK Ko, S Huang, G Pacella, N Kuprasertkul, ... Science Advances 9 (35), eadg5234, 2023 | 1 | 2023 |
| METTL3 maintains epithelial homeostasis through m6A-dependent regulation of chromatin modifiers AM Maldonado López, S Huang, G Pacella, EK Ko, H Shen, J Stoute, ... bioRxiv, 2022.12. 14.520484, 2022 | 1 | 2022 |
| Signal recovery in single cell batch integration Z Zhang, D Mathew, T Lim, K Mason, CM Martinez, S Huang, EJ Wherry, ... bioRxiv, 2023 | | 2023 |
Lana GarmireUniversity of MichiganVerified email at med.umich.edu
