| A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals P Simion, H Philippe, D Baurain, M Jager, DJ Richter, A Di Franco, ... Current biology 27 (7), 958-967, 2017 | 498 | 2017 |
| Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences A Di Franco, R Poujol, D Baurain, H Philippe BMC Evolutionary Biology 19, 1-17, 2019 | 105 | 2019 |
| Lower statistical support with larger data sets: insights from the Ochrophyta radiation A Di Franco, D Baurain, G Glöckner, M Melkonian, H Philippe Molecular Biology and Evolution 39 (1), msab300, 2022 | 13 | 2022 |
| Decontamination, pooling and dereplication of the 678 samples of the Marine Microbial Eukaryote Transcriptome Sequencing Project M Van Vlierberghe, A Di Franco, H Philippe, D Baurain BMC Research Notes 14 (1), 306, 2021 | 13 | 2021 |
| Qué innec E, Ereskovsky A, Lapé bie P, Corre E, Delsuc F, King N, Worheide G, Manuel M. 2017. A large and consistent phylogenomic dataset supports sponges as the sister group … P Simion, H Philippe, D Baurain, M Jager, DJ Richter, A Di Franco, ... Current Biology 27, 958-967, 0 | 6 | |
| A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling C Eché, C Iampietro, C Birbes, A Dréau, C Kuchly, A Di Franco, C Klopp, ... Scientific Data 10 (1), 369, 2023 | 4 | 2023 |
| Tackling the conundrum of metazoan phylogenomics: Sponges are sister to all other animals P Simion, H Philippe, D Baurain, M Jager, D Richter, ... Current Biology 27, 1-10, 2017 | 4 | 2017 |
| Major contribution to the bovine pangenome: whole genome sequences, SNPs, and structural variants of 154 bulls from 14 breeds A Suin, C Marcuzzo, C Eché, A Dréau, C Birbes, A Di Franco, CC Klopp, ... Plant and Genome San Diego 2024, 2024 | | 2024 |
| Improvement of the Bos taurus Genome Assembly using New Sequencing Technologies C Eché, C Iampietro, C Birbes, A Dreau, C Kuchly, A Di Franco, C Klopp, ... | | 2023 |
| Structural variants detection and de novo genome assembly of a maize line C Iampietro, C Eché, C Birbes, A Di Franco, A Dréau, C Kuchly, CC Klopp, ... Plant & Animal Genome Conference (PAG) 2022, 2022 | | 2022 |
| De novo assembly of bovine genome using PacBio applications C Eché, C Birbes, C Iampietro, A Dréau, C Kuchly, CC Klopp, A Di Franco, ... SMRT Leiden 2021–Young Investigator Virtual Conference, 2021 | | 2021 |
| Structural variants detection and de novo genome assembly of a Maize line C Eché, C Birbes, C Iampietro, A Di Franco, A Dréau, C Kuchly, CC Klopp, ... SMRT Leiden 2021–Young Investigator Virtual Conference, 2021 | | 2021 |
| De novo assembling 19 maize inbred lines of importance for European breeding C Vitte, C Eché, C Lampietro, E Denis, C Birbes, C Kuchy, C Klopp, ... 63rd Annual Maize Genetics Conference, 2021 | | 2021 |
| De novo assembling 19 maize inbred lines of the European germplasm C Iampietro, C Eché, C Birbes, A Dreau, E Denis, C Kuchly, CC Klopp, ... 63rd Annual Maize Genetics Meeting, 2021 | | 2021 |
| A Long Read project to find optimal technologic combinations for genome assembly and variability, epigenetic marks detection and metagenomic analysis C Iampietro, C Eché, A Castinel, RF Serre, CC Klopp, E Denis, O Bouchez, ... PAG XXVIII, Plant and Animal Genome, 2020 | | 2020 |
| Impact des violations des modèles d'annotation et d'évolution de séquences en phylogénomique: application à l'étude des eucaryotes photosynthétiques A Di Franco Université Paul Sabatier-Toulouse III, 2019 | | 2019 |
| Automated tools for the generation and interpretation of single gene trees at a broad taxonomic scale D Baurain, M Van Vlierberghe, DF Arnaud, H Philipe ECCB 2016, 2016 | | 2016 |
| Identifying losses and expansions of selected gene families in incomplete genomic datasets A Di Franco, M Hanikenne, D Baurain 8th Benelux Bioinformatics Conference, 2013 | | 2013 |
