Brandon Signal
Brandon Signal
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lncRNAdb v2. 0: expanding the reference database for functional long noncoding RNAs
XC Quek, DW Thomson, JLV Maag, N Bartonicek, B Signal, MB Clark, ...
Nucleic acids research 43 (D1), D168-D173, 2015
Unexpected features of the dark proteome
N Perdig„o, J Heinrich, C Stolte, KS Sabir, MJ Buckley, B Tabor, B Signal, ...
Proceedings of the National Academy of Sciences 112 (52), 15898-15903, 2015
Computational approaches for functional prediction and characterisation of long noncoding RNAs
B Signal, BS Gloss, ME Dinger
Trends in Genetics 32 (10), 620-637, 2016
Machine learning annotation of human branchpoints
B Signal, BS Gloss, ME Dinger, TR Mercer
Bioinformatics 34 (6), 920-927, 2018
High resolution temporal transcriptomics of mouse embryoid body development reveals complex expression dynamics of coding and noncoding loci
BS Gloss, B Signal, SW Cheetham, F Gruhl, DC Kaczorowski, AC Perkins, ...
Scientific reports 7 (1), 1-11, 2017
Transcriptome profiling analysis of the seagrass, Zostera muelleri under copper stress
NS Mohammadi, P Buapet, M Pernice, B Signal, T Kahlke, L Hardke, ...
Marine Pollution Bulletin 149, 110556, 2019
Omics and cytokine discovery in fish: presenting the Yellowtail kingfish (Seriola lalandi) as a case study
G Jacobson, S Muncaster, K Mensink, M Forlenza, N Elliot, G Broomfield, ...
Developmental & Comparative Immunology 75, 63-76, 2017
Mitochondrial genome diversity among six laboratory zebrafish (Danio rerio) strains
T Flynn, B Signal, SL Johnson, NJ Gemmell
Mitochondrial DNA Part A 27 (6), 4364-4371, 2016
Chemotaxis shapes the microscale organization of the ocean’s microbiome
JB Raina, BS Lambert, DH Parks, C Rinke, N Siboni, A Bramucci, ...
Nature 605 (7908), 132-138, 2022
Machine-learning annotation of human splicing branchpoints
B Signal, BS Gloss, ME Dinger, TR Mercer
BioRxiv, 094003, 2016
The splicing effect of variants at branchpoint elements in cancer genes
DM Canson, T Dumenil, MT Parsons, TA O’Mara, AL Davidson, S Okano, ...
Genetics in Medicine 24 (2), 398-409, 2022
how_are_we_stranded_here: quick determination of RNA-Seq strandedness
B Signal, T Kahlke
BMC bioinformatics 23 (1), 1-9, 2022
Proteome metabolome and transcriptome data for three Symbiodiniaceae under ambient and heat stress conditions
EF Camp, T Kahlke, B Signal, CA Oakley, A Lutz, SK Davy, DJ Suggett, ...
Scientific Data 9 (1), 1-10, 2022
Ten quick tips for deep learning in biology
BD Lee, A Gitter, CS Greene, S Raschka, F Maguire, AJ Titus, MD Kessler, ...
PLoS computational biology 18 (3), e1009803, 2022
Evaluation of filter, paramagnetic, and STAGETips aided workflows for proteome profiling of Symbiodiniaceae dinoflagellate
KM Supasri, M Kumar, MJ Mathew, B Signal, MP Padula, DJ Suggett, ...
Processes 9 (6), 983, 2021
Borf: Improved ORF prediction in de-novo assembled transcriptome annotation
B Signal, T Kahlke
bioRxiv, 2021
The Impact of Variants at Branchpoint Splicing Elements in Cancer Genes
D Canson, T Dumenil, M Parsons, T O’Mara, A Davidson, S Okano, ...
Genetics in Medicine (Forthcoming), 2021
High temporal resolution of gene expression dynamics in developing mouse embryonic stem cells
BS Gloss, B Signal, SW Cheetham, F Gruhl, D Kaczorowski, AC Perkins, ...
bioRxiv, 084442, 2016
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