| Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors P Kemmeren, K Sameith, LAL van de Pasch, JJ Benschop, TL Lenstra, ... Cell 157 (3), 740-752, 2014 | 318 | 2014 |
| The specificity and topology of chromatin interaction pathways in yeast TL Lenstra, JJ Benschop, TS Kim, JM Schulze, NACH Brabers, ... Molecular cell 42 (4), 536-549, 2011 | 256 | 2011 |
| Functional overlap and regulatory links shape genetic interactions between signaling pathways S Van Wageningen, P Kemmeren, P Lijnzaad, T Margaritis, JJ Benschop, ... Cell 143 (6), 991-1004, 2010 | 147 | 2010 |
| A central role for TFIID in the pluripotent transcription circuitry WWMP Pijnappel, D Esch, MPA Baltissen, G Wu, N Mischerikow, ... Nature 495 (7442), 516-519, 2013 | 88 | 2013 |
| Phenotype loss is associated with widespread divergence of the gene regulatory landscape in evolution JG Roscito, K Sameith, G Parra, BE Langer, A Petzold, C Moebius, ... Nature communications 9 (1), 1-15, 2018 | 64 | 2018 |
| Fragrep: an efficient search tool for fragmented patterns in genomic sequences A Mosig, K Sameith, P Stadler Genomics, proteomics & bioinformatics 4 (1), 56-60, 2006 | 38 | 2006 |
| Yeast glucose pathways converge on the transcriptional regulation of trehalose biosynthesis E Apweiler, K Sameith, T Margaritis, N Brabers, L van de Pasch, ... BMC genomics 13 (1), 239, 2012 | 36 | 2012 |
| Stratification of pediatric ALL by in vitro cellular responses to DNA double-strand breaks provides insight into the molecular mechanisms underlying clinical response E Marston, V Weston, J Jesson, E Maina, C McConville, A Agathanggelou, ... Blood 113 (1), 117-126, 2009 | 30 | 2009 |
| Iterative error correction of long sequencing reads maximizes accuracy and improves contig assembly K Sameith, JG Roscito, M Hiller Briefings in bioinformatics 18 (1), 1-8, 2017 | 28 | 2017 |
| The genome of the tegu lizard Salvator merianae: combining Illumina, PacBio, and optical mapping data to generate a highly contiguous assembly JG Roscito, K Sameith, M Pippel, KJ Francoijs, S Winkler, A Dahl, ... Gigascience 7 (12), giy141, 2018 | 23 | 2018 |
| A high-resolution gene expression atlas of epistasis between gene-specific transcription factors exposes potential mechanisms for genetic interactions K Sameith, S Amini, MJAG Koerkamp, D van Leenen, M Brok, N Brabers, ... BMC biology 13 (1), 112, 2015 | 23 | 2015 |
| Models and computational strategies linking physiological response to molecular networks from large-scale data F Ortega, K Sameith, N Turan, R Compton, V Trevino, M Vannucci, ... Philosophical Transactions of the Royal Society of London A: Mathematical …, 2008 | 18 | 2008 |
| Functional modules integrating essential cellular functions are predictive of the response of leukaemia cells to DNA damage K Sameith, P Antczak, E Marston, N Turan, D Maier, T Stankovic, ... Bioinformatics 24 (22), 2602-2607, 2008 | 17 | 2008 |
| Fate mapping of hematopoietic stem cells reveals two pathways of native thrombopoiesis MNF Morcos, C Li, CM Munz, A Greco, N Dressel, S Reinhardt, K Sameith, ... Nature communications 13 (1), 1-13, 2022 | 16 | 2022 |
| Convergent and lineage-specific genomic differences in limb regulatory elements in limbless reptile lineages JG Roscito, K Sameith, BM Kirilenko, N Hecker, S Winkler, A Dahl, ... Cell Reports 38 (3), 110280, 2022 | 15 | 2022 |
| Improving functional module detection KJ Abraham, K Sameith, F Falciani Bioinformatics, 2009. OCCBIO'09. Ohio Collaborative Conference on, 110-115, 2009 | 3 | 2009 |
| Inferring a transcription regulatory network by directed perturbation K Sameith | | 2013 |
