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Justin Cotney
Justin Cotney
Associate Professor, UConn Health
Verified email at uchc.edu - Homepage
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Cited by
Year
Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism
AJ Willsey, SJ Sanders, M Li, S Dong, AT Tebbenkamp, RA Muhle, ...
Cell 155 (5), 997-1007, 2013
9382013
Genomic Analysis of Non-NF2 Meningiomas Reveals Mutations in TRAF7, KLF4, AKT1, and SMO
VE Clark, EZ Erson-Omay, A Serin, J Yin, J Cotney, K Özduman, T Avşar, ...
Science 339 (6123), 1077-1080, 2013
8312013
The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment
J Cotney, RA Muhle, SJ Sanders, L Liu, AJ Willsey, W Niu, W Liu, L Klei, ...
Nature communications 6 (1), 6404, 2015
3392015
Evolutionary changes in promoter and enhancer activity during human corticogenesis
SK Reilly, J Yin, AE Ayoub, D Emera, J Leng, J Cotney, R Sarro, P Rakic, ...
Science 347 (6226), 1155-1159, 2015
2792015
The evolution of lineage-specific regulatory activities in the human embryonic limb
J Cotney, J Leng, J Yin, SK Reilly, LE DeMare, D Emera, AE Ayoub, ...
Cell 154 (1), 185-196, 2013
2462013
Mitochondrial stress engages E2F1 apoptotic signaling to cause deafness
N Raimundo, L Song, TE Shutt, SE McKay, J Cotney, MX Guan, ...
Cell 148 (4), 716-726, 2012
2242012
Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb
J Cotney, J Leng, S Oh, LE DeMare, SK Reilly, MB Gerstein, JP Noonan
Genome research 22 (6), 1069-1080, 2012
1562012
Relative abundance of the human mitochondrial transcription system and distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression
J Cotney, Z Wang, GS Shadel
Nucleic acids research 35 (12), 4042-4054, 2007
1512007
The genomic landscape of cohesin-associated chromatin interactions
LE DeMare, J Leng, J Cotney, SK Reilly, J Yin, R Sarro, JP Noonan
Genome research 23 (8), 1224-1234, 2013
1492013
Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing
AE Ayoub, S Oh, Y Xie, J Leng, J Cotney, MH Dominguez, JP Noonan, ...
Proceedings of the National Academy of Sciences 108 (36), 14950-14955, 2011
1472011
Core human mitochondrial transcription apparatus is a regulated two-component system in vitro
TE Shutt, MF Lodeiro, J Cotney, CE Cameron, GS Shadel
Proceedings of the National Academy of Sciences 107 (27), 12133-12138, 2010
1322010
High-resolution epigenomic atlas of human embryonic craniofacial development
A Wilderman, J VanOudenhove, J Kron, JP Noonan, J Cotney
Cell reports 23 (5), 1581-1597, 2018
1172018
Human mitochondrial ribosomal protein MRPL12 interacts directly with mitochondrial RNA polymerase to modulate mitochondrial gene expression
Z Wang, J Cotney, GS Shadel
Journal of biological chemistry 282 (17), 12610-12618, 2007
1142007
Evidence for an early gene duplication event in the evolution of the mitochondrial transcription factor B family and maintenance of rRNA methyltransferase activity in human …
J Cotney, GS Shadel
Journal of molecular evolution 63, 707-717, 2006
1022006
Elucidation of separate, but collaborative functions of the rRNA methyltransferase-related human mitochondrial transcription factors B1 and B2 in mitochondrial biogenesis …
J Cotney, SE McKay, GS Shadel
Human molecular genetics 18 (14), 2670-2682, 2009
972009
Mitochondrial ribosomal protein L12 selectively associates with human mitochondrial RNA polymerase to activate transcription
YV Surovtseva, TE Shutt, J Cotney, H Cimen, SY Chen, EC Koc, ...
Proceedings of the National Academy of Sciences 108 (44), 17921-17926, 2011
882011
Massively parallel discovery of human-specific substitutions that alter enhancer activity
S Uebbing, J Gockley, SK Reilly, AA Kocher, E Geller, N Gandotra, ...
Proceedings of the National Academy of Sciences 118 (2), e2007049118, 2021
81*2021
RNA-Seq profiling of spinal cord motor neurons from a presymptomatic SOD1 ALS mouse
U Bandyopadhyay, J Cotney, M Nagy, S Oh, J Leng, M Mahajan, S Mane, ...
PLoS One 8 (1), e53575, 2013
762013
Marked diversity of unique cortical enhancers enables neuron-specific tools by enhancer-driven gene expression
S Blankvoort, MP Witter, J Noonan, J Cotney, C Kentros
Current Biology 28 (13), 2103-2114. e5, 2018
692018
A bipartite boundary element restricts UBE3A imprinting to mature neurons
JS Hsiao, ND Germain, A Wilderman, C Stoddard, LA Wojenski, ...
Proceedings of the National Academy of Sciences 116 (6), 2181-2186, 2019
532019
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