William DeWitt
William DeWitt
University of Washington Department of Genome Sciences
Dirección de correo verificada de uw.edu - Página principal
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A single-cell atlas of in vivo mammalian chromatin accessibility
DA Cusanovich, AJ Hill, D Aghamirzaie, RM Daza, HA Pliner, JB Berletch, ...
Cell 174 (5), 1309-1324. e18, 2018
Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire
RO Emerson, WS DeWitt, M Vignali, J Gravley, JK Hu, EJ Osborne, ...
Nature genetics 49 (5), 659-665, 2017
Dynamics of the cytotoxic T cell response to a model of acute viral infection
WS DeWitt, RO Emerson, P Lindau, M Vignali, TM Snyder, C Desmarais, ...
Journal of virology 89 (8), 4517-4526, 2015
A public database of memory and naive B-cell receptor sequences
WS DeWitt, P Lindau, TM Snyder, AM Sherwood, M Vignali, CS Carlson, ...
PloS one 11 (8), e0160853, 2016
Human T cell receptor occurrence patterns encode immune history, genetic background, and receptor specificity
W DeWitt, A Smith, G Schoch, J Hansen, F Matsen, P Bradley
eLife, 2018
Nonlinear behaviors of contrast agents relevant to diagnostic and therapeutic applications
J Wu, J Pepe, W Dewitt III
Ultrasound in medicine & biology 29 (4), 555-562, 2003
Deep generative models for T cell receptor protein sequences
K Davidsen, BJ Olson, WS DeWitt III, J Feng, E Harkins, P Bradley, ...
Elife 8, e46935, 2019
A diverse lipid antigen–specific TCR repertoire is clonally expanded during active tuberculosis
WS DeWitt, KQ Krystle, DB Wilburn, A Sherwood, M Vignali, CL Day, ...
The Journal of Immunology 201 (3), 888-896, 2018
Using genotype abundance to improve phylogenetic inference
WS DeWitt III, L Mesin, GD Victora, VN Minin, FA Matsen IV
Molecular biology and evolution 35 (5), 1253-1265, 2018
Multiplexed digital quantitation of rearranged lymphoid receptors in a complex mixture
WS Dewitt, RO Emerson, HS Robins, AM Sherwood
US Patent 10,246,701, 2019
Methods for diagnosing infectious disease and determining hla status using immune repertoire sequencing
RO Emerson, M Rieder, HS Robins, W DEWITT III, C Carlson
Estimation of cell lineage trees by maximum-likelihood phylogenetics
J Feng, WS DeWitt III, A McKenna, N Simon, AD Willis, FA Matsen IV
The Annals of Applied Statistics 15 (1), 343-362, 2021
Inferring evolutionary dynamics of mutation rates through the lens of mutation spectrum variation
J Carlson, WS DeWitt, K Harris
Current Opinion in Genetics & Development 62, 50-57, 2020
Joint nonparametric coalescent inference of mutation spectrum history and demography
WS DeWitt, KD Harris, K Harris
bioRxiv, 2020
Replicate immunosequencing as a robust probe of B cell repertoire diversity
W DeWitt, P Lindau, T Snyder, M Vignali, R Emerson, H Robins
arXiv preprint arXiv:1410.0350, 2014
Mutational analysis of circulating tumor cells in breast cancer patients by targeted clonal sequencing.
X Xu, Y Shen, W Dewitt, D Pandya, FZ Bischoff, KD Crew, DL Hershman, ...
Journal of Clinical Oncology 30 (15_suppl), 10516-10516, 2012
Dynamics of B-cell repertoires and emergence of cross-reactive responses in COVID-19 patients with different disease severity
Z Montague, H Lv, J Otwinowski, WS DeWitt, G Isacchini, GK Yip, WW Ng, ...
arXiv preprint arXiv:2007.06762, 2020
Characterization of adaptive immune response to vaccination or infection using immunosequencing
HS Robins, WS DeWitt III, RO Emerson
US Patent App. 15/529,943, 2017
Robustness of phylogenetic inference to model misspecification caused by pairwise epistasis
AF Magee, SK Hilton, WS DeWitt
bioRxiv, 2020
mutyper: assigning and summarizing mutation types for analyzing germline mutation spectra
WS DeWitt
bioRxiv, 2020
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