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Abhilash Jayaraj
Abhilash Jayaraj
Dana Farber Cancer Institute, Harvard Medical School
Verified email at dfci.harvard.edu
Title
Cited by
Cited by
Year
Understanding the binding affinity of noscapines with protease of SARS-CoV-2 for COVID-19 using MD simulations at different temperatures
D Kumar, K Kumari, A Jayaraj, V Kumar, RV Kumar, SK Dass, R Chandra, ...
Journal of Biomolecular Structure and Dynamics 39 (7), 2659-2672, 2021
1112021
Promising inhibitors of main protease of novel corona virus to prevent the spread of COVID-19 using docking and molecular dynamics simulation
D Kumar, K Kumari, VK Vishvakarma, A Jayaraj, D Kumar, VK Ramappa, ...
Journal of Biomolecular Structure and Dynamics 39 (13), 4671-4685, 2021
572021
A theoretical model to study the interaction of erythro‐noscapines with nsP3 protease of Chikungunya virus
D Kumar, P Singh, A Jayaraj, V Kumar, K Kumari, R Patel
ChemistrySelect 4 (17), 4892-4900, 2019
352019
Development of a theoretical model for the inhibition of nsP3 of Chikungunya virus using pyranooxazoles
D Kumar, K Kumari, A Jayaraj, P Singh
Journal of Biomolecular Structure and Dynamics 38 (10), 3018-3034, 2020
332020
Trimethylamine-N-oxide switches from stabilizing nature: A mechanistic outlook through experimental techniques and molecular dynamics simulation
A Rani, A Jayaraj, B Jayaram, V Pannuru
Scientific Reports 6 (1), 23656, 2016
332016
Computational approach to study the synthesis of noscapine and potential of stereoisomers against nsP3 protease of CHIKV
P Singh, D Kumar, VK Vishvakarma, P Yadav, A Jayaraj, K Kumari
Heliyon 5 (12), 2019
282019
Emerging frontiers in virtual drug discovery: From quantum mechanical methods to deep learning approaches
C Gorgulla, A Jayaraj, K Fackeldey, H Arthanari
Current opinion in chemical biology 69, 102156, 2022
252022
In-silico prediction of novel drug-target complex of nsp3 of CHIKV through molecular dynamic simulation
D Kumar, MK Meena, K Kumari, R Patel, A Jayaraj, P Singh
Heliyon 6 (8), 2020
242020
Selective docking of pyranooxazoles against nsP2 of CHIKV eluted through isothermally and non‐isothermally MD simulations
D Kumar, P Singh, A Jayaraj, V Kumar, K Kumari, R Chandra, ...
ChemistrySelect 5 (14), 4210-4220, 2020
202020
Allosterically coupled multisite binding of testosterone to human serum albumin
A Jayaraj, HA Schwanz, DJ Spencer, S Bhasin, JA Hamilton, B Jayaram, ...
Endocrinology 162 (2), bqaa199, 2021
162021
Stimulation of heat shock protein 90 chaperone function through binding of a novobiocin analog KU-32
BK Chatterjee, A Jayaraj, V Kumar, B Blagg, RE Davis, B Jayaram, ...
Journal of Biological Chemistry 294 (16), 6450-6467, 2019
122019
Designed thiazolidines: an arsenal for the inhibition of nsP3 of CHIKV using molecular docking and MD simulations
MK Meena, D Kumar, A Jayaraj, A Kumar, K Kumari, LM Katata-Seru, ...
Journal of Biomolecular Structure and Dynamics 40 (4), 1607-1616, 2022
102022
Estradiol induces allosteric coupling and partitioning of sex-hormone-binding globulin monomers among conformational states
R Jasuja, D Spencer, A Jayaraj, L Peng, M Krishna, B Lawney, P Patel, ...
Iscience 24 (6), 2021
102021
A computational strategy for therapeutic development against superoxide dismutase (SOD1) amyloid formation: effect of polyphenols on the various events in the aggregation pathway
S Sharma, VR Tomar, A Jayaraj, S Deep
Physical Chemistry Chemical Physics 25 (8), 6232-6246, 2023
42023
A comprehensive automated computer-aided discovery pipeline from genomes to hit molecules
R Bhat, R Kaushik, A Singh, D DasGupta, A Jayaraj, A Soni, A Shandilya, ...
Chemical Engineering Science 222, 115711, 2020
32020
Approaches and Perspective of Coarse-Grained Modeling and Simulation for Polymer–Nanoparticle Hybrid Systems
P Khan, R Kaushik, A Jayaraj
ACS omega 7 (51), 47567-47586, 2022
22022
An overview of protein–ligand docking and scoring algorithms
R Bhat, A Jayaraj, A Soni, B Jayaram
PROTEIN INTERACTIONS: Computational Methods, Analysis and Applications, 371-398, 2020
22020
Development of a Web-Server for Identification of Common Lead Molecules for Multiple Protein Targets
A Jayaraj, R Bhat, A Pathak, M Singh, B Jayaram
Multi-Target Drug Design Using Chem-Bioinformatic Approaches, 487-504, 2019
22019
In silico study of interaction of (ZnO)12 nanocluster to glucose oxidase-FAD in absence and presence of glucose
AK Verma, S Sharma, A Jayaraj, S Deep
Journal of Biomolecular Structure and Dynamics 41 (24), 15234-15242, 2023
12023
Ergothioneine boosts mitochondrial respiration and exercise performance via direct activation of MPST
HG Sprenger, MJ Mittenbuehler, Y Sun, JG Van Vranken, S Schindler, ...
bioRxiv, 2024.04. 10.588849, 2024
2024
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