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Sabrina de Azevedo Silveira
Sabrina de Azevedo Silveira
Professor at Department of Computer Science, Universidade Federal de Viçosa
Correu electrònic verificat a ufv.br
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nAPOLI: a graph-based strategy to detect and visualize conserved protein-ligand interactions in large-scale
AV Fassio, LH Santos, SA Silveira, RS Ferreira, RC de Melo-Minardi
IEEE/ACM transactions on computational biology and bioinformatics 17 (4 …, 2019
402019
Propedia: a database for protein–peptide identification based on a hybrid clustering algorithm
PM Martins, LH Santos, D Mariano, FC Queiroz, LL Bastos, IS Gomes, ...
BMC bioinformatics 22, 1-20, 2021
262021
Protein structural bioinformatics: An overview
V de Almeida Paiva, I de Souza Gomes, CR Monteiro, MV Mendonça, ...
Computers in Biology and Medicine 147, 105695, 2022
202022
GRaSP: a graph-based residue neighborhood strategy to predict binding sites
CA Santana, SA Silveira, JPA Moraes, SC Izidoro, RC de Melo-Minardi, ...
Bioinformatics 36 (Supplement_2), i726-i734, 2020
182020
Protein abundance prediction through machine learning methods
M Ferreira, R Ventorim, E Almeida, S Silveira, W Silveira
Journal of molecular biology 433 (22), 167267, 2021
172021
Enzymap: Exploiting protein annotation for modeling and predicting ec number changes in uniprot/swiss-prot
SA Silveira, RC de Melo-Minardi, CH da Silveira, MM Santoro, W Meira Jr
PloS one 9 (2), e89162, 2014
112014
ADVISe: Visualizing the dynamics of enzyme annotations in UniProt/Swiss-Prot
SA Silveira, AO Rodrigues, RC de Melo-Minardi, CH da Silveira, W Meira
2012 IEEE Symposium on Biological Data Visualization (BioVis), 49-56, 2012
112012
Vermont: a multi-perspective visual interactive platform for mutational analysis
AV Fassio, PM Martins, SS Guimarães, SSA Junior, VS Ribeiro, ...
BMC bioinformatics 18, 51-63, 2017
82017
Vermont: Visualizing mutations and their effects on protein physicochemical and topological property conservation
SA Silveira, AV Fassio, VM Gonçalves-Almeida, EB de Lima, YT Barcelos, ...
BMC proceedings 8, 1-10, 2014
82014
GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs
CA Santana, SC Izidoro, RC de Melo-Minardi, JD Tyzack, AJM Ribeiro, ...
Nucleic Acids Research 50 (W1), W392-W397, 2022
72022
visGReMLIN: graph mining-based detection and visualization of conserved motifs at 3D protein-ligand interface at the atomic level
VS Ribeiro, CA Santana, AV Fassio, FR Cerqueira, CH da Silveira, ...
BMC bioinformatics 21, 1-12, 2020
72020
Synthesis and virucide activity on zika virus of 1, 2, 3-triazole-containing vanillin derivatives
JV da Silva Rodrigues, PAR Gazolla, I da Cruz Pereira, RS Dias, ...
Antiviral Research 212, 105578, 2023
62023
Computational prediction of potential inhibitors for SARS-COV-2 main protease based on machine learning, docking, MM-PBSA calculations, and metadynamics
IS Gomes, CA Santana, LS Marcolino, LHF Lima, RC Melo-Minardi, ...
PLoS One 17 (4), e0267471, 2022
62022
ppiGReMLIN: a graph mining based detection of conserved structural arrangements in protein-protein interfaces
FC Queiroz, AMP Vargas, MGA Oliveira, GV Comarela, SA Silveira
BMC bioinformatics 21, 1-25, 2020
62020
How to compute protein residue contacts more accurately?
PM Martins, VD Mayrink, S de A. Silveira, CH da Silveira, LHF de Lima, ...
Proceedings of the 33rd Annual ACM Symposium on Applied Computing, 60-67, 2018
62018
Gremlin: A graph mining strategy to infer protein-ligand interaction patterns
CA Santana, FR Cerqueira, CH Da Silveira, AV Fassio, ...
2016 IEEE 16th International Conference on Bioinformatics and Bioengineering …, 2016
62016
GASS-Metal: identifying metal-binding sites on protein structures using genetic algorithms
VA Paiva, MV Mendonça, SA Silveira, DB Ascher, DEV Pires, SC Izidoro
Briefings in Bioinformatics 23 (5), bbac178, 2022
32022
Revealing protein-ligand interaction patterns through frequent subgraph mining
SA Silveira, AV Fassio, CH da Silveira, RC de Melo-Minardi
Proceedings of the International Conference on Bioinformatics …, 2015
32015
RLPredictiOme, a Machine Learning-Derived Method for High-Throughput Prediction of Plant Receptor-like Proteins, Reveals Novel Classes of Transmembrane Receptors
JCF Silva, MA Ferreira, TFM Carvalho, FF Silva, S de A. Silveira, ...
International Journal of Molecular Sciences 23 (20), 12176, 2022
22022
CALI: A novel visual model for frequent pattern mining in protein-ligand graphs
SG Medina, AV Fassio, SA Silveira, CH da Silveira, RC de Melo-Minardi
2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017
22017
En aquests moments el sistema no pot dur a terme l'operació. Torneu-ho a provar més tard.
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