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Farzaneh Khajouei
Farzaneh Khajouei
Senior Computational Scientist, Broad Institute of MIT and Harvard
Verified email at broadinstitute.org - Homepage
Title
Cited by
Cited by
Year
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
2832021
A guide to the BRAIN Initiative Cell Census Network data ecosystem
M Hawrylycz, ME Martone, GA Ascoli, JG Bjaalie, HW Dong, SS Ghosh, ...
PLoS biology 21 (6), e3002133, 2023
172023
The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain
SA Ament, RS Adkins, R Carter, E Chrysostomou, C Colantuoni, ...
Nucleic acids research 51 (D1), D1075-D1085, 2023
162023
An information theoretic treatment of sequence-to-expression modeling
F Khajouei, S Sinha
PLoS computational biology 14 (9), e1006459, 2018
62018
An algorithmic approach for finding deletion correcting codes
F Khajouei, M Zolghadr, N Kiyavash
2011 IEEE Information Theory Workshop, 25-29, 2011
42011
Global shape of Toll activation is determined by wntD enhancer properties
N Rahimi, S Carmon, I Averbukh, F Khajouei, S Sinha, ED Schejter, ...
Proceedings of the National Academy of Sciences 117 (3), 1552-1558, 2020
32020
Model-based analysis of polymorphisms in an enhancer reveals cis-regulatory mechanisms
F Khajouei, N Samper, NJ Djabrayan, B Lunt, G Jiménez, S Sinha
bioRxiv, 2020.02. 07.939264, 2020
22020
WDL Analysis Research Pipelines: Cloud-Optimized Workflows for Biological Data Processing and Reproducible Analysis
K Degatano, A Awdeh, W Dingman, G Grant, F Khajouei, E Kiernan, ...
Preprints, 2024
2024
A guide to the BRAIN Initiative Cell Census Network data ecosystem.
G Ascoli, J Bjaalie, HW Dong, S Ghosh, J Gillis, R Hertzano, D Haynor, ...
PLoS Biology 21 (6), 2023
2023
Understanding the functional consequences of genetic variation on gene regulation
F Khajouei
University of Illinois at Urbana-Champaign, 2020
2020
A constructive lower bound for cardinality of codebooks capable of correcting multiple deletion and insertions
F Khajouei
University of Illinois at Urbana-Champaign, 2012
2012
The BRAIN Initiative Cell Census Network Data Ecosystem: A User’s Guide
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Articles 1–12