| A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021 | 209 | 2021 |
| Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions D Butler, C Mozsary, C Meydan, J Foox, J Rosiene, A Shaiber, D Danko, ... Nature communications 12 (1), 1660, 2021 | 141 | 2021 |
| Shotgun transcriptome and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions DJ Butler, C Mozsary, C Meydan, D Danko, J Foox, J Rosiene, A Shaiber, ... BioRxiv, 2020 | 83 | 2020 |
| Relationships between SARS-CoV-2 in wastewater and COVID-19 clinical cases and hospitalizations, with and without normalization against indicators of human waste Q Zhan, KM Babler, ME Sharkey, A Amirali, CC Beaver, MM Boone, ... Acs Es&T Water 2 (11), 1992-2003, 2022 | 56 | 2022 |
| Lessons learned from SARS-CoV-2 measurements in wastewater ME Sharkey, N Kumar, AMA Mantero, KM Babler, MM Boone, ... Science of The Total Environment 798, 149177, 2021 | 40 | 2021 |
| Global genetic cartography of urban metagenomes and anti-microbial resistance D Danko, D Bezdan, E Afshinnekoo, S Ahsanuddin, C Bhattacharya, ... BioRxiv, 724526, 2019 | 33 | 2019 |
| Host, viral, and environmental transcriptome profiles of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) DJ Butler, C Mozsary, C Meydan, D Danko, J Foox, J Rosiene, A Shaiber, ... bioRxiv, 2020.04. 20.048066, 2020 | 24 | 2020 |
| A comprehensive metagenomics framework to characterize organisms relevant for planetary protection DC Danko, MA Sierra, JN Benardini, L Guan, JM Wood, N Singh, ... Microbiome 9, 1-15, 2021 | 17 | 2021 |
| The microbe directory v2. 0: An expanded database of ecological and phenotypical features of microbes MA Sierra, C Bhattacharya, K Ryon, S Meierovich, H Shaaban, D Westfall, ... BioRxiv, 2019.12. 20.860569, 2019 | 11 | 2019 |
| A history of the MetaSUB consortium: Tracking urban microbes around the globe KA Ryon, BT Tierney, A Frolova, A Kahles, C Desnues, C Ouzounis, ... Iscience 25 (11), 2022 | 8 | 2022 |
| Metagenomic characterization of bacterial community and antibiotic resistance genes found in the mass transit system in Seoul, South Korea RB Guevarra, J Hwang, H Lee, HJ Kim, Y Lee, D Danko, KA Ryon, ... Ecotoxicology and Environmental Safety 246, 114176, 2022 | 8 | 2022 |
| Detecting non-cognitive features of prodromal neurodegenerative diseases A Seifan, CA Ganzer, K Ryon, M Lin, R Mahmudur, H Adolfo, C Shih, ... Current Aging Science 11 (4), 242-249, 2018 | 6 | 2018 |
| Microbiome and metagenomic analysis of Lake Hillier Australia reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations MA Sierra, KA Ryon, BT Tierney, J Foox, C Bhattacharya, E Afshin, ... Environmental Microbiome 17 (1), 60, 2022 | 5 | 2022 |
| Cross-kingdom metagenomic profiling of Lake Hillier reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations MA Sierra, KA Ryon, BT Tierney, J Foox, C Bhattacharya, E Afshin, ... BioRxiv, 2022.02. 17.480683, 2022 | 4 | 2022 |
| Supervised machine learning enables geospatial microbial provenance C Bhattacharya, BT Tierney, KA Ryon, M Bhattacharyya, JJA Hastings, ... Genes 13 (10), 1914, 2022 | 2 | 2022 |
| Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA) EG Overbey, K Ryon, JK Kim, B Tierney, R Klotz, V Ortiz, S Mullane, ... bioRxiv, 2023 | 1 | 2023 |
| Cyanobacteria newly isolated from marine volcanic seeps display rapid sinking and robust, high density growth MG Schubert, TC Tang, IM Goodchild-Michelman, KA Ryon, JR Henriksen, ... bioRxiv, 2023.10. 30.564770, 2023 | 1 | 2023 |
| Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium VS Flores, DE Amgarten, BKV Iha, KA Ryon, D Danko, BT Tierney, ... Scientific Reports 14 (1), 7913, 2024 | | 2024 |
| Wastewater based surveillance can be used to reduce clinical testing intensity on a university campus A Amirali, KM Babler, ME Sharkey, CC Beaver, MM Boone, S Comerford, ... Science of The Total Environment 918, 170452, 2024 | | 2024 |
| Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight JS Garcia-Medina, K Sienkiewicz, SA Narayanan, EG Overbey, ... Precision Clinical Medicine 7 (1), pbae007, 2024 | | 2024 |
