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James F. Matthews
James F. Matthews
Verified email at ucsf.edu
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Year
Computer simulation studies of microcrystalline cellulose Iβ
JF Matthews, CE Skopec, PE Mason, P Zuccato, RW Torget, J Sugiyama, ...
Carbohydrate research 341 (1), 138-152, 2006
4142006
Molecular-level origins of biomass recalcitrance: decrystallization free energies for four common cellulose polymorphs
GT Beckham, JF Matthews, B Peters, YJ Bomble, ME Himmel, ...
The Journal of Physical Chemistry B 115 (14), 4118-4127, 2011
2162011
Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase
GT Beckham, JF Matthews, YJ Bomble, L Bu, WS Adney, ME Himmel, ...
The Journal of Physical Chemistry B 114 (3), 1447-1453, 2010
1372010
Harnessing glycosylation to improve cellulase activity
GT Beckham, Z Dai, JF Matthews, M Momany, CM Payne, WS Adney, ...
Current opinion in biotechnology 23 (3), 338-345, 2012
1342012
High-temperature behavior of cellulose I
JF Matthews, M Bergenstråhle, GT Beckham, ME Himmel, MR Nimlos, ...
The Journal of Physical Chemistry B 115 (10), 2155-2166, 2011
1332011
Comparison of cellulose Iβ simulations with three carbohydrate force fields
JF Matthews, GT Beckham, M Bergenstrahle-Wohlert, JW Brady, ...
Journal of Chemical Theory and Computation 8 (2), 735-748, 2012
1302012
The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein
GT Beckham, YJ Bomble, JF Matthews, CB Taylor, MG Resch, ...
Biophysical journal 99 (11), 3773-3781, 2010
1082010
Volume IV. The DUNE far detector single-phase technology
B Abi, R Acciarri, MA Acero, G Adamov, D Adams, M Adinolfi, Z Ahmad, ...
Journal of Instrumentation 15 (08), T08010, 2020
972020
Molecular modeling suggests induced fit of Family I carbohydrate-binding modules with a broken-chain cellulose surface
MR Nimlos, JF Matthews, MF Crowley, RC Walker, G Chukkapalli, ...
Protein Engineering, Design & Selection 20 (4), 179-187, 2007
952007
Binding preferences, surface attachment, diffusivity, and orientation of a family 1 carbohydrate-binding module on cellulose
MR Nimlos, GT Beckham, JF Matthews, L Bu, ME Himmel, MF Crowley
Journal of Biological Chemistry 287 (24), 20603-20612, 2012
872012
The energy landscape for the interaction of the family 1 carbohydrate-binding module and the cellulose surface is altered by hydrolyzed glycosidic bonds
L Bu, GT Beckham, MF Crowley, CH Chang, JF Matthews, YJ Bomble, ...
The Journal of Physical Chemistry B 113 (31), 10994-11002, 2009
812009
3D electron tomography of pretreated biomass informs atomic modeling of cellulose microfibrils
PN Ciesielski, JF Matthews, MP Tucker, GT Beckham, MF Crowley, ...
ACS nano 7 (9), 8011-8019, 2013
752013
Computational simulations of the Trichoderma reesei cellobiohydrolase I acting on microcrystalline cellulose Iβ: the enzyme–substrate complex
L Zhong, JF Matthews, PI Hansen, MF Crowley, JM Cleary, RC Walker, ...
Carbohydrate research 344 (15), 1984-1992, 2009
612009
Interactions of the complete cellobiohydrolase I from Trichodera reesei with microcrystalline cellulose Iβ
L Zhong, JF Matthews, MF Crowley, T Rignall, C Talón, JM Cleary, ...
Cellulose 15 (2), 261-273, 2008
562008
Modeling the self-assembly of the cellulosome enzyme complex
YJ Bomble, GT Beckham, JF Matthews, MR Nimlos, ME Himmel, ...
Journal of Biological Chemistry 286 (7), 5614-5623, 2011
482011
Conversion of cellulose Iα to Iβ via a high temperature intermediate (I-HT) and other cellulose phase transformations
JF Matthews, ME Himmel, MF Crowley
Cellulose 19 (1), 297-306, 2012
462012
Structures of plant cell wall celluloses.
RH Atalla, JW Brady, JF Matthews, SY Ding, ME Himmel
Biomass recalcitrance: deconstructing the plant cell wall for bioenergy, 188-212, 2009
452009
Multiscale deconstruction of molecular architecture in corn stover
H Inouye, Y Zhang, L Yang, N Venugopalan, RF Fischetti, SC Gleber, ...
Scientific reports 4 (1), 1-7, 2014
412014
Coarse-grain model for glucose, cellobiose, and cellotetraose in water
AP Hynninen, JF Matthews, GT Beckham, MF Crowley, MR Nimlos
Journal of chemical theory and computation 7 (7), 2137-2150, 2011
292011
Volume III. DUNE far detector technical coordination
B Abi, R Acciarri, MA Acero, G Adamov, D Adams, M Adinolfi, Z Ahmad, ...
Journal of instrumentation 15 (08), T08009, 2020
272020
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